BLASTX nr result

ID: Glycyrrhiza23_contig00035028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035028
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71230.1| hypothetical protein [Trifolium pratense]              94   2e-17
ref|XP_003544015.1| PREDICTED: uncharacterized protein LOC100789...    66   3e-09
ref|XP_003556774.1| PREDICTED: uncharacterized protein LOC100808...    64   2e-08

>dbj|BAE71230.1| hypothetical protein [Trifolium pratense]
          Length = 957

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 56/89 (62%), Positives = 62/89 (69%)
 Frame = +3

Query: 78  QSASKGKPAESPSNRVLVLSTPVQEATTXXXXXXXXXXXXHHSNIQDLSHRGNSDGHVVD 257
           +SA KGKPA SP NR L LS+P+QEATT              S+IQDLS   NSDGH VD
Sbjct: 311 KSALKGKPARSPPNRFLDLSSPIQEATTALPSLQEPP-----SDIQDLSPWINSDGHGVD 365

Query: 258 LDNNHHPVPQVAQSPLTKSGIEVSSGKKR 344
           LDNNHH   QVAQSPL K+GIEVSSG+KR
Sbjct: 366 LDNNHHLTFQVAQSPL-KTGIEVSSGEKR 393



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/48 (79%), Positives = 41/48 (85%)
 Frame = +3

Query: 204 SNIQDLSHRGNSDGHVVDLDNNHHPVPQVAQSPLTKSGIEVSSGKKRK 347
           S+I+ L HR NSDGH VDLDNN HP  QVAQSPLTK+GIEVSSGKKRK
Sbjct: 433 SDIRALCHRINSDGHGVDLDNNCHPTLQVAQSPLTKTGIEVSSGKKRK 480


>ref|XP_003544015.1| PREDICTED: uncharacterized protein LOC100789038 [Glycine max]
          Length = 1130

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +3

Query: 207 NIQDLSHRGNSDGHVVDLDNNHHPVPQVAQSPLTKSGIEVSSGKKRK 347
           N+QDLS +GN DGH   LDN++H   QVAQSPLTKSGI +SSGKKRK
Sbjct: 614 NMQDLSPKGNLDGH--GLDNSYHSALQVAQSPLTKSGINISSGKKRK 658



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +3

Query: 207 NIQDLSHRGNSDGHVVDLDNNHHPVPQVAQSPLTKSGIEVSSGKK 341
           ++QDL+ +GN DGH   LDN++H   QVAQSPLTKSGI +SSGKK
Sbjct: 566 SMQDLTPKGNLDGH--GLDNSYHSACQVAQSPLTKSGINISSGKK 608


>ref|XP_003556774.1| PREDICTED: uncharacterized protein LOC100808104 [Glycine max]
          Length = 1078

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/82 (46%), Positives = 48/82 (58%)
 Frame = +3

Query: 96  KPAESPSNRVLVLSTPVQEATTXXXXXXXXXXXXHHSNIQDLSHRGNSDGHVVDLDNNHH 275
           +  E   + +LV S P+QE T                ++QDLS +GN DGH   LDN++H
Sbjct: 450 RTVEKGKDEILVPSPPIQEVTPQLCSLQDPP------SMQDLSPKGNLDGH--GLDNSYH 501

Query: 276 PVPQVAQSPLTKSGIEVSSGKK 341
            V QVAQS LTKSGI +SSGKK
Sbjct: 502 SVLQVAQSHLTKSGISISSGKK 523



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 47/126 (37%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
 Frame = +3

Query: 3   QTVANKLELSGFGNSEQPSSPFEVAQS--------ASKGKPAES---PSNRVLVLSTPVQ 149
           Q ++ K  L G G      S  +VAQS         S GK  +     ++   VL     
Sbjct: 483 QDLSPKGNLDGHGLDNSYHSVLQVAQSHLTKSGISISSGKKLQDYGLDNSYHSVLQVAQS 542

Query: 150 EATTXXXXXXXXXXXXHHSNIQDLSHRGNSDGHVVDLDNNHHPVPQVAQSPLTKSGIEVS 329
             T                N+QDLS + N DGH   L N++H   QVAQSPLTKSGI +S
Sbjct: 543 PLTKSGISISSGKKLQDSPNVQDLSPKSNLDGH--GLHNSYHSALQVAQSPLTKSGINIS 600

Query: 330 SGKKRK 347
           SGKKRK
Sbjct: 601 SGKKRK 606


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