BLASTX nr result

ID: Glycyrrhiza23_contig00035025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035025
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   215   3e-54
ref|XP_002308898.1| condensin complex components subunit [Populu...   197   6e-49
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,...   195   3e-48
ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like ...   195   3e-48
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   195   3e-48

>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/110 (96%), Positives = 108/110 (98%)
 Frame = +1

Query: 1    SHSEIVRSNCTIALGDLAVRFPNILEPWTENMYCRLKDPCVSVRKNAVLVLSHLILNDMM 180
            +HSEIVRSNCTIALGDLAVRFPN+LEPWTENMY RLKDPC SVRKNAVLVLSHLILNDMM
Sbjct: 965  AHSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPCASVRKNAVLVLSHLILNDMM 1024

Query: 181  KVKGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 330
            KVKGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL
Sbjct: 1025 KVKGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 1074


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +1

Query: 7    SEIVRSNCTIALGDLAVRFPNILEPWTENMYCRLKDPCVSVRKNAVLVLSHLILNDMMKV 186
            SE VRSNCTIALGDLAVRFPN+LEPWTENMY RL+DP VSVRKNAVLVLSHLILNDMMKV
Sbjct: 989  SETVRSNCTIALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKV 1048

Query: 187  KGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 330
            KGYINEMA+RLEDE ERISNLAKLFF ELSKKG+NPIYNLLPDIL KL
Sbjct: 1049 KGYINEMAIRLEDEQERISNLAKLFFHELSKKGSNPIYNLLPDILGKL 1096


>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
            sativus]
          Length = 1133

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/108 (90%), Positives = 101/108 (93%)
 Frame = +1

Query: 7    SEIVRSNCTIALGDLAVRFPNILEPWTENMYCRLKDPCVSVRKNAVLVLSHLILNDMMKV 186
            S+IVRSNCTIALGDLAVRFPN+LEPWTENMY RLKDP  SVRKNAVLVLSHLILNDMMKV
Sbjct: 984  SDIVRSNCTIALGDLAVRFPNLLEPWTENMYVRLKDPSNSVRKNAVLVLSHLILNDMMKV 1043

Query: 187  KGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 330
            KGYINEM +RLEDEDERISNLAKLFF ELSKKG NPIYNLLPDIL KL
Sbjct: 1044 KGYINEMTLRLEDEDERISNLAKLFFHELSKKGANPIYNLLPDILGKL 1091


>ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like [Cucumis sativus]
          Length = 1321

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/108 (90%), Positives = 101/108 (93%)
 Frame = +1

Query: 7    SEIVRSNCTIALGDLAVRFPNILEPWTENMYCRLKDPCVSVRKNAVLVLSHLILNDMMKV 186
            S+IVRSNCTIALGDLAVRFPN+LEPWTENMY RLKDP  SVRKNAVLVLSHLILNDMMKV
Sbjct: 984  SDIVRSNCTIALGDLAVRFPNLLEPWTENMYVRLKDPSNSVRKNAVLVLSHLILNDMMKV 1043

Query: 187  KGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 330
            KGYINEM +RLEDEDERISNLAKLFF ELSKKG NPIYNLLPDIL KL
Sbjct: 1044 KGYINEMTLRLEDEDERISNLAKLFFHELSKKGANPIYNLLPDILGKL 1091


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/108 (88%), Positives = 103/108 (95%)
 Frame = +1

Query: 7    SEIVRSNCTIALGDLAVRFPNILEPWTENMYCRLKDPCVSVRKNAVLVLSHLILNDMMKV 186
            SE VR+NCTIALGDLAVRFPN+LEPWTENMY RL+DP VSVRKNAVLVLSHLILNDMMKV
Sbjct: 989  SETVRTNCTIALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKV 1048

Query: 187  KGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKL 330
            KGY+NEMA+ LEDEDERISNLAKLFF ELSKKG+NP+YNLLPDILSKL
Sbjct: 1049 KGYLNEMALCLEDEDERISNLAKLFFHELSKKGSNPVYNLLPDILSKL 1096


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