BLASTX nr result

ID: Glycyrrhiza23_contig00035024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035024
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycin...   188   4e-46
ref|XP_003547726.1| PREDICTED: protein BREVIS RADIX-like [Glycin...   185   3e-45
ref|XP_003517077.1| PREDICTED: protein BREVIS RADIX-like [Glycin...   158   5e-37
ref|XP_003534310.1| PREDICTED: protein BREVIS RADIX-like [Glycin...   155   2e-36
ref|XP_002303464.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
          Length = 349

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/95 (92%), Positives = 91/95 (95%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   SSSTPAWDFTTSNYPGGRADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVE 169
           SSSTPAWDFTTS+YPGGR+DPRF    GGDRTPRGRDS+SVCDVVLEDEDEPKEWMAQVE
Sbjct: 88  SSSTPAWDFTTSHYPGGRSDPRFAGAYGGDRTPRGRDSSSVCDVVLEDEDEPKEWMAQVE 147

Query: 170 PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 274
           PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW
Sbjct: 148 PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 182


>ref|XP_003547726.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
          Length = 349

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/95 (91%), Positives = 89/95 (93%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   SSSTPAWDFTTSNYPGGRADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVE 169
           SSSTPAWDFTTS+YPGGR+DPRF    GGDRTPR RDS SVCDVVLEDEDEPKEWMAQVE
Sbjct: 88  SSSTPAWDFTTSHYPGGRSDPRFAGAFGGDRTPRARDSTSVCDVVLEDEDEPKEWMAQVE 147

Query: 170 PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 274
           PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW
Sbjct: 148 PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 182


>ref|XP_003517077.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
          Length = 348

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/95 (77%), Positives = 82/95 (86%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   SSSTPAWDFTTSNYPGGRADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVE 169
           S+STPAWDFT+SN+ G R+D RF     GDRTPRG  SA  CDVV+EDEDE KEWMAQVE
Sbjct: 88  STSTPAWDFTSSNFLGARSDQRFMGGFSGDRTPRGPQSAPACDVVVEDEDETKEWMAQVE 147

Query: 170 PGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 274
           PGVHITFVSLPNGGNDLKRIRFSRE+F+KWQAQ+W
Sbjct: 148 PGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKW 182


>ref|XP_003534310.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
          Length = 353

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/96 (78%), Positives = 83/96 (86%), Gaps = 5/96 (5%)
 Frame = +2

Query: 2   SSSTPAWDFTTSNYPGGRADPRF----GGDRTPRGRDSASVCDVVL-EDEDEPKEWMAQV 166
           S+STPAWDFT+SN+PGGR+D RF     GDRTPRG  SA   DVV+ EDEDE KEWMAQV
Sbjct: 90  STSTPAWDFTSSNFPGGRSDQRFMGRFSGDRTPRGPQSAPASDVVVVEDEDETKEWMAQV 149

Query: 167 EPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 274
           EPGVHITFVSLPNGGNDLKRIRFSRE+F+KWQAQ+W
Sbjct: 150 EPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKW 185


>ref|XP_002303464.1| predicted protein [Populus trichocarpa] gi|222840896|gb|EEE78443.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/96 (82%), Positives = 81/96 (84%), Gaps = 5/96 (5%)
 Frame = +2

Query: 2   SSSTPAWDFTTSNYPGG-RADPRF----GGDRTPRGRDSASVCDVVLEDEDEPKEWMAQV 166
           SSSTPAWDFTT  +  G RAD RF    GGDRTP G +S   CDVVLEDEDEPKEWMAQV
Sbjct: 91  SSSTPAWDFTTPKHNRGTRADSRFSTLYGGDRTPGGAES---CDVVLEDEDEPKEWMAQV 147

Query: 167 EPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 274
           EPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW
Sbjct: 148 EPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRW 183


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