BLASTX nr result

ID: Glycyrrhiza23_contig00035011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035011
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago ...   117   1e-24
ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...   115   4e-24
ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811...   113   2e-23
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795...   110   2e-22
ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810...   107   8e-22

>ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago truncatula]
           gi|355512644|gb|AES94267.1| COPII coat assembly protein
           sec16 [Medicago truncatula]
          Length = 1584

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 VDYVQYQEGQ-CYDATTGNSTSGLDLSSNQYWESLYPGWKYDHNIGQWYQVYDLNATTTT 84
           V+YVQYQEG   YDA++    +G DLSS+Q WE LYPGWKYDH  GQWYQ+ D NATTT+
Sbjct: 256 VNYVQYQEGGGAYDASSNLHNNGQDLSSSQNWEDLYPGWKYDHITGQWYQIEDYNATTTS 315

Query: 83  HGNSKVNTTVDWIDASDAKADVSYLQQ 3
              S+ NT VDW  ASD K ++SYLQQ
Sbjct: 316 QQTSEANTAVDWAAASDGKTEISYLQQ 342


>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1523

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/86 (63%), Positives = 65/86 (75%)
 Frame = -3

Query: 260 VDYVQYQEGQCYDATTGNSTSGLDLSSNQYWESLYPGWKYDHNIGQWYQVYDLNATTTTH 81
           VDYVQYQEGQ YDA+  NSTSG D++S+QYWESLYPGWKYD+N GQWYQV + NAT  T 
Sbjct: 209 VDYVQYQEGQSYDASARNSTSGEDVNSSQYWESLYPGWKYDYNTGQWYQVDEHNATAATQ 268

Query: 80  GNSKVNTTVDWIDASDAKADVSYLQQ 3
           G+S+VNT           A+VSY+QQ
Sbjct: 269 GSSEVNT-----------AEVSYMQQ 283


>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
          Length = 1423

 Score =  113 bits (282), Expect = 2e-23
 Identities = 49/86 (56%), Positives = 63/86 (73%)
 Frame = -3

Query: 260 VDYVQYQEGQCYDATTGNSTSGLDLSSNQYWESLYPGWKYDHNIGQWYQVYDLNATTTTH 81
           V++VQYQE Q Y A++   T+G DLSS+QYWE LYPGWKYDH  GQWYQ+   +AT TT 
Sbjct: 226 VNHVQYQEDQAYVASSEEHTNGQDLSSSQYWEDLYPGWKYDHKTGQWYQIDGNSATATTQ 285

Query: 80  GNSKVNTTVDWIDASDAKADVSYLQQ 3
            +S+ NT  DW  ASD + ++SY+QQ
Sbjct: 286 QSSEANTAADWTAASDRETEISYMQQ 311


>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
          Length = 1424

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = -3

Query: 260 VDYVQYQEGQCYDATTGNSTSGLDLSSNQYWESLYPGWKYDHNIGQWYQVYDLNATTTTH 81
           V++VQY E Q Y A++     G DLSS+QYWE LYPGWKYDH  GQWYQ+   +AT TT 
Sbjct: 224 VNHVQYPEDQAYVASSEEHAYGQDLSSSQYWEDLYPGWKYDHQTGQWYQIDGYSATATTQ 283

Query: 80  GNSKVNTTVDWIDASDAKADVSYLQQ 3
            +S+VNT  DW  ASD + ++SY+QQ
Sbjct: 284 QSSEVNTAADWTAASDRETEISYMQQ 309


>ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810562 [Glycine max]
          Length = 1420

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = -3

Query: 260 VDYVQYQEGQCYDATTGNSTSGLDLSSNQYWESLYPGWKYDHNIGQWYQVYDLNATTTTH 81
           V++VQYQEG+ Y A++   T+G DLSS+QYWE LYPGWKYD+  GQWYQ+    AT TT 
Sbjct: 224 VNHVQYQEGETYVASSEEHTNGQDLSSSQYWEDLYPGWKYDYKTGQWYQIDGYRATATTQ 283

Query: 80  GNSKVNTTVDWIDASDAKADVSYLQQ 3
            +S+ N  VD   ASD K ++SY+QQ
Sbjct: 284 QSSEANIAVDSSAASDGKTEISYMQQ 309


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