BLASTX nr result

ID: Glycyrrhiza23_contig00035000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035000
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   179   3e-43
ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...   170   1e-40
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   163   2e-38
emb|CBI27286.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   160   1e-37

>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/92 (89%), Positives = 91/92 (98%)
 Frame = -1

Query: 276 GLLRLRRAGEATEVFREMIRRGCEPTMHTYVMLLQGHLGRRGRKGSDPLINFDTIFVGGL 97
           GLL+LRRAGEAT+VFREMIRRGCEPTMHTY+MLLQGHLGRRGRKG+DPL+NFDTIFVGG+
Sbjct: 350 GLLKLRRAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDTIFVGGM 409

Query: 96  VKAGRSREATKYAERVMNRGMEVPRFDYNKFL 1
           VKAG+S+EATKY ERV+NRGMEVPRFDYNKFL
Sbjct: 410 VKAGKSKEATKYVERVLNRGMEVPRFDYNKFL 441


>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/92 (84%), Positives = 87/92 (94%)
 Frame = -1

Query: 276 GLLRLRRAGEATEVFREMIRRGCEPTMHTYVMLLQGHLGRRGRKGSDPLINFDTIFVGGL 97
           GLL+LRRA EAT+VFREMI+RGCEPTMHTY+MLLQGHLGRRGRKG+DPL+NFD+IFVGG+
Sbjct: 353 GLLKLRRASEATQVFREMIKRGCEPTMHTYIMLLQGHLGRRGRKGTDPLVNFDSIFVGGM 412

Query: 96  VKAGRSREATKYAERVMNRGMEVPRFDYNKFL 1
           VK G S+EA KY ERVMNRGMEVPRFDYNKFL
Sbjct: 413 VKVGHSKEAIKYVERVMNRGMEVPRFDYNKFL 444


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/92 (81%), Positives = 85/92 (92%)
 Frame = -1

Query: 276 GLLRLRRAGEATEVFREMIRRGCEPTMHTYVMLLQGHLGRRGRKGSDPLINFDTIFVGGL 97
           GLL+L+RA EAT+VFREMI RGCEP MHTY+MLLQGHLG+RGRKGSDPL+NFD+IFVGGL
Sbjct: 361 GLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLGKRGRKGSDPLVNFDSIFVGGL 420

Query: 96  VKAGRSREATKYAERVMNRGMEVPRFDYNKFL 1
           VK G+S EATKY ER+M RG+EVPRFDYNKFL
Sbjct: 421 VKNGKSLEATKYVERLMKRGLEVPRFDYNKFL 452


>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  160 bits (405), Expect = 1e-37
 Identities = 72/92 (78%), Positives = 86/92 (93%)
 Frame = -1

Query: 276 GLLRLRRAGEATEVFREMIRRGCEPTMHTYVMLLQGHLGRRGRKGSDPLINFDTIFVGGL 97
           GLLRLR+AGEAT+VFREMIRRGCEPTMHTY+MLLQGHLG++GRKG  PL+NFD+IFVGGL
Sbjct: 353 GLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGKKGRKGPHPLVNFDSIFVGGL 412

Query: 96  VKAGRSREATKYAERVMNRGMEVPRFDYNKFL 1
           +K G+S +A+KY ER+M+ GMEVPRFDYN+FL
Sbjct: 413 IKVGKSLDASKYVERMMDGGMEVPRFDYNRFL 444


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  160 bits (405), Expect = 1e-37
 Identities = 72/92 (78%), Positives = 86/92 (93%)
 Frame = -1

Query: 276 GLLRLRRAGEATEVFREMIRRGCEPTMHTYVMLLQGHLGRRGRKGSDPLINFDTIFVGGL 97
           GLLRLR+AGEAT+VFREMIRRGCEPTMHTY+MLLQGHLG++GRKG  PL+NFD+IFVGGL
Sbjct: 355 GLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGKKGRKGPHPLVNFDSIFVGGL 414

Query: 96  VKAGRSREATKYAERVMNRGMEVPRFDYNKFL 1
           +K G+S +A+KY ER+M+ GMEVPRFDYN+FL
Sbjct: 415 IKVGKSLDASKYVERMMDGGMEVPRFDYNRFL 446


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