BLASTX nr result

ID: Glycyrrhiza23_contig00034990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034990
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590907.1| Pentatricopeptide repeat-containing protein ...   104   7e-21
ref|XP_002299290.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003556897.1| PREDICTED: probable leucine-rich repeat rece...    72   5e-11
ref|XP_002283031.2| PREDICTED: probable leucine-rich repeat rece...    71   8e-11
emb|CBI33340.3| unnamed protein product [Vitis vinifera]               71   8e-11

>ref|XP_003590907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479955|gb|AES61158.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 2047

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/79 (68%), Positives = 61/79 (77%)
 Frame = -1

Query: 239  VLLELLTGKKPIQSLDQGGGDLVTWVRNHVHKYSLSLDNFXXXXXXXXXXXXXDVAQILD 60
            VLLELLTGKKP+QSLDQGGGDLVTWV N+++KYSL LDN              DVAQ+ D
Sbjct: 1941 VLLELLTGKKPVQSLDQGGGDLVTWVTNNINKYSLKLDNI--LDAKLDLLHEIDVAQVFD 1998

Query: 59   VLKIALLCTDTSPSRRPSM 3
            VLKIAL+CTD SPSRRP+M
Sbjct: 1999 VLKIALMCTDNSPSRRPTM 2017


>ref|XP_002299290.1| predicted protein [Populus trichocarpa] gi|222846548|gb|EEE84095.1|
            predicted protein [Populus trichocarpa]
          Length = 1106

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/79 (54%), Positives = 50/79 (63%)
 Frame = -1

Query: 239  VLLELLTGKKPIQSLDQGGGDLVTWVRNHVHKYSLSLDNFXXXXXXXXXXXXXDVAQILD 60
            VLLELLTGK P+Q LDQGG DLVTW R +V ++SL+                  VA ++ 
Sbjct: 998  VLLELLTGKTPVQPLDQGG-DLVTWARQYVREHSLTSG---ILDERLDLEDQSTVAHMIY 1053

Query: 59   VLKIALLCTDTSPSRRPSM 3
            VLKIALLCT  SPS RPSM
Sbjct: 1054 VLKIALLCTSMSPSDRPSM 1072


>ref|XP_003556897.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At2g33170-like [Glycine max]
          Length = 1162

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/79 (50%), Positives = 51/79 (64%)
 Frame = -1

Query: 239  VLLELLTGKKPIQSLDQGGGDLVTWVRNHVHKYSLSLDNFXXXXXXXXXXXXXDVAQILD 60
            VLLELLTG+ P+Q L+QGG DLVTWVRNH+  ++ +L                 V  +L 
Sbjct: 1054 VLLELLTGRTPVQPLEQGG-DLVTWVRNHIRDHNNTLTP-EMLDSRVDLEDQTTVNHMLT 1111

Query: 59   VLKIALLCTDTSPSRRPSM 3
            VLK+ALLCT  SP++RPSM
Sbjct: 1112 VLKLALLCTSVSPTKRPSM 1130


>ref|XP_002283031.2| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At2g33170-like [Vitis vinifera]
          Length = 1105

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/79 (50%), Positives = 52/79 (65%)
 Frame = -1

Query: 239  VLLELLTGKKPIQSLDQGGGDLVTWVRNHVHKYSLSLDNFXXXXXXXXXXXXXDVAQILD 60
            VLLELLTG+ P+Q LDQ GGDLV+WVRN++  +SL+ + F              V  ++ 
Sbjct: 999  VLLELLTGRTPVQPLDQ-GGDLVSWVRNYIRDHSLTSEIF---DTRLNLEDENTVDHMIA 1054

Query: 59   VLKIALLCTDTSPSRRPSM 3
            VLKIA+LCT+ SP  RPSM
Sbjct: 1055 VLKIAILCTNMSPPDRPSM 1073


>emb|CBI33340.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/79 (50%), Positives = 52/79 (65%)
 Frame = -1

Query: 239  VLLELLTGKKPIQSLDQGGGDLVTWVRNHVHKYSLSLDNFXXXXXXXXXXXXXDVAQILD 60
            VLLELLTG+ P+Q LDQ GGDLV+WVRN++  +SL+ + F              V  ++ 
Sbjct: 926  VLLELLTGRTPVQPLDQ-GGDLVSWVRNYIRDHSLTSEIF---DTRLNLEDENTVDHMIA 981

Query: 59   VLKIALLCTDTSPSRRPSM 3
            VLKIA+LCT+ SP  RPSM
Sbjct: 982  VLKIAILCTNMSPPDRPSM 1000