BLASTX nr result

ID: Glycyrrhiza23_contig00034989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034989
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621847.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   131   5e-29
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   121   5e-26
ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
emb|CBI26532.3| unnamed protein product [Vitis vinifera]              104   7e-21

>ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496862|gb|AES78065.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/85 (85%), Positives = 81/85 (95%)
 Frame = -1

Query: 257 VEQGLEILLEMRGKGYTFDGFAYCTVVAALVKTGRIKEADEIAEQMMSNGVQPDLASYNT 78
           +EQGLEIL EMR KG+TFDGFAYCTVVAALVKTGRI+EADEIAE+MMSNG+ PDLASYNT
Sbjct: 234 LEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNT 293

Query: 77  MINLYCRQGRFEEALRLVDVIEKEG 3
           MINL+CRQGRF+EALRLVD IEK+G
Sbjct: 294 MINLFCRQGRFDEALRLVDEIEKQG 318


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/84 (71%), Positives = 75/84 (89%)
 Frame = -1

Query: 254 EQGLEILLEMRGKGYTFDGFAYCTVVAALVKTGRIKEADEIAEQMMSNGVQPDLASYNTM 75
           E+GLEIL EMR  G+TFDGFAYCTV+AA++KTGR++EA+EI E M+S+GV+PDL SYNT+
Sbjct: 239 EEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTL 298

Query: 74  INLYCRQGRFEEALRLVDVIEKEG 3
           INLYCRQGR ++ALRL+D IE EG
Sbjct: 299 INLYCRQGRLDDALRLLDEIEGEG 322


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = -1

Query: 254 EQGLEILLEMRGKGYTFDGFAYCTVVAALVKTGRIKEADEIAEQMMSNGVQPDLASYNTM 75
           +QGLEIL EM  KGYTFDGFAYCTVV  L+KTGR++EA E   QM+ NG++ DLASYNT+
Sbjct: 264 KQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTL 323

Query: 74  INLYCRQGRFEEALRLVDVIEKEG 3
           INLYC+QG  E A +L+D IEKEG
Sbjct: 324 INLYCKQGNLEAAYQLLDEIEKEG 347


>ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|222854743|gb|EEE92290.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/84 (61%), Positives = 64/84 (76%)
 Frame = -1

Query: 254 EQGLEILLEMRGKGYTFDGFAYCTVVAALVKTGRIKEADEIAEQMMSNGVQPDLASYNTM 75
           EQGLEI  EM  KGYTFDGFAYCTVV ALVKT RI+EA    E+M++  +  D+ASYNT+
Sbjct: 234 EQGLEIFEEMIDKGYTFDGFAYCTVVGALVKTCRIEEASHYMERMVNTDIGLDMASYNTL 293

Query: 74  INLYCRQGRFEEALRLVDVIEKEG 3
           INLYC+ G+ E A  ++D +EKEG
Sbjct: 294 INLYCKGGKLEMAHGVLDKMEKEG 317


>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = -1

Query: 254 EQGLEILLEMRGKGYTFDGFAYCTVVAALVKTGRIKEADEIAEQMMSNGVQPDLASYNTM 75
           EQG EI  EM+ KGY FD F+YC V+AAL KTGR++EA++I EQM  + +  D+ SYNT+
Sbjct: 218 EQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTV 277

Query: 74  INLYCRQGRFEEALRLVDVIEKEG 3
           +NLYCR G+ E   +L+D IE+ G
Sbjct: 278 MNLYCRNGKLEATYKLLDEIEEHG 301


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