BLASTX nr result

ID: Glycyrrhiza23_contig00034962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034962
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628145.1| Dof zinc finger protein [Medicago truncatula...    97   1e-18
ref|XP_002275127.1| PREDICTED: dof zinc finger protein DOF5.2-li...    72   4e-11
ref|XP_002319195.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002525674.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002325441.1| f-box family protein [Populus trichocarpa] g...    61   1e-07

>ref|XP_003628145.1| Dof zinc finger protein [Medicago truncatula]
           gi|358348447|ref|XP_003638258.1| Dof zinc finger protein
           [Medicago truncatula] gi|355504193|gb|AES85396.1| Dof
           zinc finger protein [Medicago truncatula]
           gi|355522167|gb|AET02621.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 439

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/82 (60%), Positives = 56/82 (68%)
 Frame = +2

Query: 2   YPVPPWTYQWNPCWNTMAFRPSSITSSPAYTGSATMMAVPRFCTPTIEVPVAPSSPYWGC 181
           Y  PPWTY   PCWN +AF+  +ITSSPA     TMM        T+EVP+ PS  YWGC
Sbjct: 273 YSAPPWTY---PCWNPVAFKSDNITSSPA-----TMM--------TVEVPMTPS--YWGC 314

Query: 182 MPSWVGQKEEFSLVGSAFNGIP 247
           MP+WVGQ EE SLVGSAFNGIP
Sbjct: 315 MPNWVGQMEELSLVGSAFNGIP 336


>ref|XP_002275127.1| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 494

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
 Frame = +2

Query: 2   YPVPPWTYQWNPCWNTMA------------FRPSSITSSPAYTGSATMMAVPRFCTPTIE 145
           YPVPPW + WNP W  +A            + P++   +     S  M+AVP FC PTI 
Sbjct: 291 YPVPPWAFPWNPGWTNVAPVAPPQCSSDTVYAPNNSNPNSVQWCSRPMLAVPGFCAPTIP 350

Query: 146 VPVAPSSPYWGCMPSWVGQKEEFSLVGS 229
           + + P S YWGCMP W       SL GS
Sbjct: 351 LQLVPPS-YWGCMPIWGAGTGNISLAGS 377


>ref|XP_002319195.1| predicted protein [Populus trichocarpa] gi|222857571|gb|EEE95118.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
 Frame = +2

Query: 2   YPVPPWTYQWNPCWNTMAFRPSSITSSPAYTG--------------SATMMAVPRFCTPT 139
           Y VP W + WNP WN +A    S+T++   TG              S  M+AVP  C P 
Sbjct: 292 YSVPSWVFPWNPGWNNVA----SMTAAQHSTGQACVTNIPNQVQLCSTPMLAVPSICPPN 347

Query: 140 IEVPVAPSSPYWGCMPSWVGQKEEFSLVGS 229
           I +   P+S YWGCMP+W       SL GS
Sbjct: 348 IPLQFVPAS-YWGCMPTWAAGTRNVSLSGS 376


>ref|XP_002525674.1| conserved hypothetical protein [Ricinus communis]
           gi|223534974|gb|EEF36657.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
 Frame = +2

Query: 2   YPVPPWTYQWNPCWNTMAFRPSSITSSPAYTGSATM----------------MAVPRFCT 133
           YPVPPW + WNP WN      +SIT++   TG   M                +AVP FC 
Sbjct: 302 YPVPPWVFPWNPNWN----NATSITTAQHSTGQPCMPNSNNSNQVQWCPTPILAVPSFCP 357

Query: 134 PTIEVPVAPSSPYWGCMPSWVGQKEEFSLVGS 229
           P+I + + P+S Y GCMP W       S+ GS
Sbjct: 358 PSIPLQLVPAS-YLGCMPVWGAGAGNISVNGS 388


>ref|XP_002325441.1| f-box family protein [Populus trichocarpa]
           gi|222862316|gb|EEE99822.1| f-box family protein
           [Populus trichocarpa]
          Length = 493

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
 Frame = +2

Query: 2   YPVPPWTYQWNPCWN---TMAFRPSS-----ITSSPAYTG--SATMMAVPRFCTPTIEVP 151
           Y VP W + WNP WN   +MA    S     IT+ P         M+AVP  C P I + 
Sbjct: 291 YSVPSWVFPWNPAWNNETSMAAAQYSSGQACITNVPTQVQLCPTPMLAVPSICPPNIPLQ 350

Query: 152 VAPSSPYWGCMPSWVGQKEEFSLVGS 229
             P+S YWGCMP+W        L GS
Sbjct: 351 FVPAS-YWGCMPTWTAGTGNVPLCGS 375


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