BLASTX nr result

ID: Glycyrrhiza23_contig00034953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034953
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       112   2e-23
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      112   2e-23
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   104   6e-21
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   104   6e-21
gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymera...   100   2e-19

>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = -3

Query: 240 SQKGVTLCQRKYCLDLLDDTGFLGSKPAKTPLDPAVKLHLDSSKIYEDVPSYCRLIRKLL 61
           S  G++LCQRKYCLDLL+D+G LGSKP  TP DP++KLH D+S ++ D+ +Y RLI +L+
Sbjct: 336 SHSGISLCQRKYCLDLLNDSGLLGSKPVSTPSDPSIKLHNDTSLLFPDISAYRRLIGRLI 395

Query: 60  YLTTTRSDISFATQQLSQFL 1
           YL TTR DI+F TQQLSQFL
Sbjct: 396 YLNTTRPDITFITQQLSQFL 415


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/80 (66%), Positives = 65/80 (81%)
 Frame = -3

Query: 240  SQKGVTLCQRKYCLDLLDDTGFLGSKPAKTPLDPAVKLHLDSSKIYEDVPSYCRLIRKLL 61
            S++G++LCQRKYCLDLL D+G + SKP  TP D ++KLH DSS +YED+ SY RLI +LL
Sbjct: 1032 SKQGISLCQRKYCLDLLADSGLVNSKPVSTPSDRSIKLHNDSSPLYEDISSYRRLIGRLL 1091

Query: 60   YLTTTRSDISFATQQLSQFL 1
            YL TTR DI+F TQQLSQFL
Sbjct: 1092 YLNTTRPDITFITQQLSQFL 1111


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/80 (61%), Positives = 61/80 (76%)
 Frame = -3

Query: 240  SQKGVTLCQRKYCLDLLDDTGFLGSKPAKTPLDPAVKLHLDSSKIYEDVPSYCRLIRKLL 61
            S+ G+T+ QRKYCLDLL D+G LG KPA TPLD ++KLH  +   Y D+  Y R++ KLL
Sbjct: 1140 SRLGITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLL 1199

Query: 60   YLTTTRSDISFATQQLSQFL 1
            YL TTR DI+FATQQLSQF+
Sbjct: 1200 YLNTTRPDIAFATQQLSQFM 1219


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/80 (61%), Positives = 61/80 (76%)
 Frame = -3

Query: 240  SQKGVTLCQRKYCLDLLDDTGFLGSKPAKTPLDPAVKLHLDSSKIYEDVPSYCRLIRKLL 61
            S+ G+T+ QRKYCLDLL D+G LG KPA TPLD ++KLH  +   Y D+  Y R++ KLL
Sbjct: 976  SRLGITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLL 1035

Query: 60   YLTTTRSDISFATQQLSQFL 1
            YL TTR DI+FATQQLSQF+
Sbjct: 1036 YLNTTRPDIAFATQQLSQFM 1055


>gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymerase) [Medicago
           truncatula]
          Length = 293

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/73 (60%), Positives = 58/73 (79%)
 Frame = -3

Query: 240 SQKGVTLCQRKYCLDLLDDTGFLGSKPAKTPLDPAVKLHLDSSKIYEDVPSYCRLIRKLL 61
           S+ G++LCQRKYCLDLL+D+G  GSKP  TP DP++KLH DS+  + D+P+Y RLI +LL
Sbjct: 221 SKSGISLCQRKYCLDLLEDSGLTGSKPMNTPSDPSIKLHNDSAPSFPDIPAYRRLIGRLL 280

Query: 60  YLTTTRSDISFAT 22
           YL TTR DI++ T
Sbjct: 281 YLNTTRPDITYIT 293


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