BLASTX nr result

ID: Glycyrrhiza23_contig00034951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034951
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_003596227.1| Pentatricopeptide repeat-containing protein,...    55   4e-06

>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -2

Query: 201 RQARSLHQRIANSTLSHYYSNLIRKHTHPA-KGKGSGSKYLTQYNTQISENGRNGDVRAA 25
           + +R+LH+RI    L  + S L + H + +    G GSK+L Q NTQI+ENGRNG+V+ A
Sbjct: 3   QHSRTLHKRITKLNL--FQSKLNQSHNNDSINSGGKGSKFLIQCNTQIAENGRNGNVKEA 60

Query: 24  ETIFHRMP 1
           E+IFH+MP
Sbjct: 61  ESIFHKMP 68


>ref|XP_003596227.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355485275|gb|AES66478.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 402

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = -2

Query: 210 MNCRQARSLHQRIANSTLSHYYSNLIRKHTHPAKGKGSGSKYLTQYNTQISENGRNGDVR 31
           M    AR++ QRI N T         +  T+ AKG    SK++T+ N +ISENGRNG+V 
Sbjct: 1   MKFHYARNIQQRIINLT---------QNQTNIAKG----SKFITECNVKISENGRNGNVN 47

Query: 30  AAETIFHRM 4
           AAETIF+RM
Sbjct: 48  AAETIFNRM 56


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