BLASTX nr result

ID: Glycyrrhiza23_contig00034935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034935
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containin...   160   1e-37
ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin...   160   1e-37
ref|XP_002526299.1| zinc finger protein, putative [Ricinus commu...   127   1e-27
ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...   124   6e-27
emb|CBI26957.3| unnamed protein product [Vitis vinifera]              124   6e-27

>ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 321

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/95 (78%), Positives = 80/95 (84%)
 Frame = +2

Query: 2   SLPKSISVRSNGYLKMAQXXXXXXXXXXXCRTKGATRSRASSTPPDAVQKVYVRGGQKEE 181
           SLPKSISVRSNGYLKM+Q            R KGATR RAS+TPP+ VQKVYVRGG+KEE
Sbjct: 165 SLPKSISVRSNGYLKMSQSAALAPNNNNATRNKGATRPRASATPPEPVQKVYVRGGEKEE 224

Query: 182 EPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQF 286
           EPLEM+VYNQGMFKTELCNKWQETGTCPYGDHCQF
Sbjct: 225 EPLEMIVYNQGMFKTELCNKWQETGTCPYGDHCQF 259


>ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 360

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/95 (80%), Positives = 79/95 (83%)
 Frame = +2

Query: 2   SLPKSISVRSNGYLKMAQXXXXXXXXXXXCRTKGATRSRASSTPPDAVQKVYVRGGQKEE 181
           SLPKSISVRSNGYLK AQ            R KGATR RAS+TPP+ VQKVYVRGGQKEE
Sbjct: 204 SLPKSISVRSNGYLKTAQSAALAPNNSNATRNKGATRPRASATPPEPVQKVYVRGGQKEE 263

Query: 182 EPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQF 286
           EPLEM+VYNQGMFKTELCNKWQETGTCPYGDHCQF
Sbjct: 264 EPLEMIVYNQGMFKTELCNKWQETGTCPYGDHCQF 298


>ref|XP_002526299.1| zinc finger protein, putative [Ricinus communis]
           gi|223534380|gb|EEF36088.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 311

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/95 (67%), Positives = 72/95 (75%)
 Frame = +2

Query: 2   SLPKSISVRSNGYLKMAQXXXXXXXXXXXCRTKGATRSRASSTPPDAVQKVYVRGGQKEE 181
           +LPKSISVRS+GYLK +Q            +T+G TRS+  S   D   KVYVRGGQKEE
Sbjct: 170 TLPKSISVRSDGYLKTSQPTAS--------KTRGTTRSKPQSQL-DGAHKVYVRGGQKEE 220

Query: 182 EPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQF 286
           EPLE+ VYNQGMFKTELCNKWQETGTCPYGD+CQF
Sbjct: 221 EPLEVEVYNQGMFKTELCNKWQETGTCPYGDNCQF 255


>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +2

Query: 2   SLPKSISVRSNGYLKMAQXXXXXXXXXXXCRTKGATRSRASSTPPDAVQKVYVRGGQKEE 181
           +LPKSISVRSNGYLKM+Q            RT+   R R +S P +  QKVYVRG +KEE
Sbjct: 247 TLPKSISVRSNGYLKMSQPGTSEGG-----RTRIPNRLRTTS-PLNGTQKVYVRGVKKEE 300

Query: 182 EPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQF 286
           EP+E+ VYNQGMFKTELCNKWQE+GTCPYGDHCQF
Sbjct: 301 EPVELEVYNQGMFKTELCNKWQESGTCPYGDHCQF 335


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +2

Query: 2   SLPKSISVRSNGYLKMAQXXXXXXXXXXXCRTKGATRSRASSTPPDAVQKVYVRGGQKEE 181
           +LPKSISVRSNGYLKM+Q            RT+   R R +S P +  QKVYVRG +KEE
Sbjct: 249 TLPKSISVRSNGYLKMSQPGTSEGG-----RTRIPNRLRTTS-PLNGTQKVYVRGVKKEE 302

Query: 182 EPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQF 286
           EP+E+ VYNQGMFKTELCNKWQE+GTCPYGDHCQF
Sbjct: 303 EPVELEVYNQGMFKTELCNKWQESGTCPYGDHCQF 337


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