BLASTX nr result

ID: Glycyrrhiza23_contig00034926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034926
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624058.1| TMV resistance protein N [Medicago truncatul...   177   1e-42
ref|XP_003624006.1| TMV resistance protein N [Medicago truncatul...   164   5e-39
ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Gl...   150   8e-35
ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Gl...   147   9e-34
ref|XP_003624057.1| TMV resistance protein N [Medicago truncatul...   146   2e-33

>ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
            gi|355499073|gb|AES80276.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1127

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/108 (76%), Positives = 90/108 (83%)
 Frame = -2

Query: 324  FGSPGQLSLFSEKFQSLRKASCLPTARFDMLIPGNEIPSWFVPQRCVSWAKIQVPNNCPL 145
            F SP QLSL  E F+S  +  CLPT RFDMLIPG+EIPSWFVPQR VSW K+ +PNN P 
Sbjct: 954  FASPIQLSLPRE-FKSFMEGRCLPTTRFDMLIPGDEIPSWFVPQRSVSWEKVHIPNNFPQ 1012

Query: 144  DEWVGFALCFLLVSYAVPPESCKHEIDCYLFSPKGKELISTRRLPPME 1
            DEWVGFALCFLLVSYAVPPE C HEIDCYLFSP GK+LISTRRLPPM+
Sbjct: 1013 DEWVGFALCFLLVSYAVPPELCNHEIDCYLFSPNGKQLISTRRLPPMD 1060


>ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
            gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
            gi|355499021|gb|AES80224.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1134

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/108 (70%), Positives = 86/108 (79%)
 Frame = -2

Query: 324  FGSPGQLSLFSEKFQSLRKASCLPTARFDMLIPGNEIPSWFVPQRCVSWAKIQVPNNCPL 145
            F SP +LS   E ++      CLPT RFDMLIPG+EIPSWFVPQR VSWAK+ +PNN P 
Sbjct: 958  FASPRKLSYVQELYKRFEDR-CLPTTRFDMLIPGDEIPSWFVPQRSVSWAKVHIPNNFPQ 1016

Query: 144  DEWVGFALCFLLVSYAVPPESCKHEIDCYLFSPKGKELISTRRLPPME 1
            DEWVGFALCFLLVSYA PPE CKHEIDCYLF+  GK+LI+TR LPPM+
Sbjct: 1017 DEWVGFALCFLLVSYADPPELCKHEIDCYLFASNGKKLITTRSLPPMD 1064


>ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  150 bits (380), Expect = 8e-35
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = -2

Query: 258  LPTARFDMLIPGNEIPSWFVPQRCVSWAKIQVPNNCPLDEWVGFALCFLLVSYAVPPESC 79
            LP  RF+MLIPG+EIPSWFVPQ+CVS AKI VP+NCP++EWVGFALCFLLVSYA PPE+C
Sbjct: 979  LPRTRFEMLIPGSEIPSWFVPQKCVSLAKIPVPHNCPVNEWVGFALCFLLVSYANPPEAC 1038

Query: 78   KHEIDCYLFSPKGKELISTRRLPPME 1
             HE++CYLF P GK +IS+R LPPME
Sbjct: 1039 HHEVECYLFGPNGKTIISSRNLPPME 1064


>ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/105 (64%), Positives = 82/105 (78%)
 Frame = -2

Query: 315  PGQLSLFSEKFQSLRKASCLPTARFDMLIPGNEIPSWFVPQRCVSWAKIQVPNNCPLDEW 136
            P +L    E  Q L    CLP  RF M I G+EIPSWFVP++ VS+AKI VP+NCP++EW
Sbjct: 904  PRELIGLFENMQEL----CLPKTRFGMFITGSEIPSWFVPRKSVSFAKIAVPHNCPVNEW 959

Query: 135  VGFALCFLLVSYAVPPESCKHEIDCYLFSPKGKELISTRRLPPME 1
            VGFALCFLLVSYAVPPE+C+HE+DCYLF P GK++IS+R L PME
Sbjct: 960  VGFALCFLLVSYAVPPEACRHEVDCYLFGPNGKKIISSRNLLPME 1004


>ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
            gi|355499072|gb|AES80275.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1122

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/108 (67%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
 Frame = -2

Query: 303  SLFSEKF---QSLRKASCLPTARFDMLIP--GNEIPSWFVPQRCVSWAKIQVPNNCPLDE 139
            SL + KF   +S  K  CLP  RFDMLIP  G+EIPSW V Q  VSWAK+ +PNN P DE
Sbjct: 948  SLETRKFDPIESFMKGRCLPATRFDMLIPFPGDEIPSWCVSQGSVSWAKVHIPNNLPQDE 1007

Query: 138  WVGFALCFLLVSYAVPPESCKHEIDCYLFSPKGKE--LISTRRLPPME 1
            WVGFALCF LVSY  PPE C HEIDCYLFSP GK+  LISTRRLPPM+
Sbjct: 1008 WVGFALCFQLVSYTFPPELCNHEIDCYLFSPNGKQLILISTRRLPPMD 1055


Top