BLASTX nr result

ID: Glycyrrhiza23_contig00034914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034914
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   147   7e-34
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   145   4e-33
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   135   5e-30
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...    98   6e-19
emb|CBI24213.3| unnamed protein product [Vitis vinifera]               87   1e-15

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = -2

Query: 348  AWKRRRRTESDDHFQGQPPPQRTMSNGIRITDPNSLGILGAGPSDKRFVSEKPYRTQPGG 169
            AWKRRRRTESD+HFQGQPPPQRT+SNGIRITDPNSLGILGAGPSDKRF SEKPYRTQPGG
Sbjct: 1693 AWKRRRRTESDNHFQGQPPPQRTLSNGIRITDPNSLGILGAGPSDKRFASEKPYRTQPGG 1752

Query: 168  FPSRQGFSSGI 136
            FPSRQGFSSGI
Sbjct: 1753 FPSRQGFSSGI 1763


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = -2

Query: 348  AWKRRRRTESDDHFQGQPPPQRTMSNGIRITDPNSLGILGAGPSDKRFVSEKPYRTQPGG 169
            AWKRRRRTESD+HFQGQPPPQRT+SNG+RI DPNSLGILGAGPSDKRF SEKPYRTQPGG
Sbjct: 1696 AWKRRRRTESDNHFQGQPPPQRTVSNGVRIADPNSLGILGAGPSDKRFASEKPYRTQPGG 1755

Query: 168  FPSRQGFSSGI 136
            FPSRQGFSSGI
Sbjct: 1756 FPSRQGFSSGI 1766


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = -2

Query: 348  AWKRRRRTESDDHFQGQPPPQRTMSNGIRITDPNSLGILGAGPSDKRFVSEKPYRTQPGG 169
            AWKRRRR ES+DHFQGQPPPQRT SNGIRITDPNSLGILGAGPSDKR VSEKP+RTQPGG
Sbjct: 1672 AWKRRRRAESEDHFQGQPPPQRTSSNGIRITDPNSLGILGAGPSDKRLVSEKPFRTQPGG 1731

Query: 168  FPSRQGFS 145
            FPS QGFS
Sbjct: 1732 FPSSQGFS 1739


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/71 (70%), Positives = 54/71 (76%)
 Frame = -2

Query: 348  AWKRRRRTESDDHFQGQPPPQRTMSNGIRITDPNSLGILGAGPSDKRFVSEKPYRTQPGG 169
            AWKRRRR E+D  FQGQPPPQR  SNGIR  DPNSLGILGAGPS + F  EK  +TQP G
Sbjct: 2013 AWKRRRRAENDGCFQGQPPPQRITSNGIRPLDPNSLGILGAGPS-QCFSGEKLLKTQPAG 2071

Query: 168  FPSRQGFSSGI 136
             PSRQ FS G+
Sbjct: 2072 SPSRQEFSLGV 2082


>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = -2

Query: 348  AWKRRRRTES-DDHFQGQPPPQRTMSNGIRITDPNSLGILGAGPSD-KRFVSEKPYRTQP 175
            AWKRRRR ++ + H   QP PQR MSNG R+ DPNSLGILG+GP+D +RF +EKP R + 
Sbjct: 1466 AWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRFGNEKPSRMRQ 1525

Query: 174  GGFPSRQGFSSGI 136
             G+P RQGFSS I
Sbjct: 1526 SGYPPRQGFSSVI 1538


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