BLASTX nr result

ID: Glycyrrhiza23_contig00034908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034908
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   201   7e-50
ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   200   1e-49
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   142   4e-32
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   129   3e-28
ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806...   118   4e-25

>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  201 bits (510), Expect = 7e-50
 Identities = 101/156 (64%), Positives = 119/156 (76%)
 Frame = +1

Query: 1   LEHDKYGLGDIVLLGNSKRMKIDCHKGLGEVFLDHRVDDLYRCLVPMSRWKHYLESMIKL 180
           LEH  YGLGDIVL GNSKRMKID +K LGEVFL++RVDDL     PM+ W + LESMIKL
Sbjct: 381 LEHGSYGLGDIVLFGNSKRMKIDSYKDLGEVFLENRVDDLLHAFSPMTGWINSLESMIKL 440

Query: 181 LKDPEDQYASYKHDMNDDDKDVMSLEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVM 360
           LKDPE+QY  YK+D+N+    VMSLE+FA    + V+ AY SY K C+   PMTLE+FV 
Sbjct: 441 LKDPEEQYDLYKNDVNEG--VVMSLEEFANGNYNHVKNAYFSYTKHCEHDCPMTLEEFVK 498

Query: 361 KKYDYIVEQYEMYIDDKKLGADITMEQFLRQRFCLI 468
           KKYDYI+EQY+MY DDKKL   ++MEQFLRQRFC I
Sbjct: 499 KKYDYIIEQYDMYKDDKKLSIGMSMEQFLRQRFCFI 534


>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/154 (62%), Positives = 122/154 (79%)
 Frame = +1

Query: 1   LEHDKYGLGDIVLLGNSKRMKIDCHKGLGEVFLDHRVDDLYRCLVPMSRWKHYLESMIKL 180
           LEH  YGLGDI+L GNSKRMKI+ +KGLGEVFLD+RVDDL  C  PM+ WK+ LESMI L
Sbjct: 318 LEHGSYGLGDILLFGNSKRMKIESYKGLGEVFLDNRVDDLLYCFSPMTGWKNCLESMISL 377

Query: 181 LKDPEDQYASYKHDMNDDDKDVMSLEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVM 360
           LKDPE+QYA Y +  +++  +VMSLE+FA    S V+PAY+SY+KRCK H  +TLE+FV 
Sbjct: 378 LKDPEEQYALYLNSKHNE--NVMSLEEFAVGNYSHVKPAYLSYKKRCKYHCLLTLEEFVK 435

Query: 361 KKYDYIVEQYEMYIDDKKLGADITMEQFLRQRFC 462
           KKY YIVEQY++Y DDKK+   ++MEQF +Q+FC
Sbjct: 436 KKYGYIVEQYDIYQDDKKVSVGMSMEQFFKQKFC 469


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/158 (48%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
 Frame = +1

Query: 1   LEHD--KYGLGDIVLLGNSKRMKIDCHKGLGEVFLDHRVDDLYRCLVPMSRWKHYLESMI 174
           LEHD   YGLGDIV+ GN  RMK+DC++ L ++FLD+RV +L RC  P + WKHYLESMI
Sbjct: 333 LEHDVDTYGLGDIVIFGNRSRMKVDCYRCLQDIFLDYRVSNLLRCFAPFTGWKHYLESMI 392

Query: 175 KLLKDPEDQYASYKHDMNDDDKDVMSLEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQF 354
            LL++P  +Y  YK D    +  +MSLE F   +  +VE AY SY++  K+ DP+TL QF
Sbjct: 393 ALLENPSKKYGMYKLDA---ENSIMSLEQFTMLKHEEVELAYSSYKQHEKNDDPLTLAQF 449

Query: 355 VMKKYDYIVEQYEMYIDDKKLGADITMEQFLRQRFCLI 468
           V K       +Y  Y +DKK  + +T EQF++ RF  I
Sbjct: 450 VKK-------EYHSYKEDKK-NSIMTFEQFVKMRFSSI 479


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517466|gb|AES99089.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  129 bits (323), Expect = 3e-28
 Identities = 69/153 (45%), Positives = 98/153 (64%)
 Frame = +1

Query: 1   LEHDKYGLGDIVLLGNSKRMKIDCHKGLGEVFLDHRVDDLYRCLVPMSRWKHYLESMIKL 180
           +EHD YGLGDIVL GN+KRMK+D + GLG++FLD+RV +L +C  P++ WK  LESM + 
Sbjct: 333 VEHDTYGLGDIVLFGNNKRMKLDSYPGLGDIFLDYRVRNLMQCFSPLTGWKQTLESMTQF 392

Query: 181 LKDPEDQYASYKHDMNDDDKDVMSLEDFAKERCSKVEPAYISYQKRCKSHDPMTLEQFVM 360
           LKDP+ +Y S          D  SLE+F  E+   V  AY +Y++  +  D MTLE++V 
Sbjct: 393 LKDPKKEYLS--------QIDHKSLEEFVNEKHCHVISAYRAYKRISRIDDTMTLEEYVQ 444

Query: 361 KKYDYIVEQYEMYIDDKKLGADITMEQFLRQRF 459
           K +  I E+Y     D K+   +T EQF+++RF
Sbjct: 445 KLWKEIAEEYRSDEID-KVENFMTFEQFVKKRF 476


>ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
          Length = 975

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   LEHDKYGLGDIVLLGNSKRMKIDCHKGLGEVFLDHRVDDLYRCLVPMSRWKHYLESMIKL 180
           L  D YGLGDIVL GN  RMK+D + GL +VFLDHRV +L +C  P+S WKHYLESMI+L
Sbjct: 386 LGFDTYGLGDIVLFGNKSRMKVDSYTGLRDVFLDHRVQNLSKCFDPLSGWKHYLESMIQL 445

Query: 181 LKDPEDQYASYKHDMNDDDKDVMSLEDFAKERCSKVEPAYISYQK--RCKSHDPMTLEQF 354
           L+DP++QY+SY     + +K ++S +DF  +        + + ++    +S D + + ++
Sbjct: 446 LEDPKEQYSSY-----EKEKGIVSFKDFVMQNYPSFGLQFHASKEGWELQSTDSI-ITEY 499

Query: 355 VMKKYDYIVEQYEMYIDDKKLGADITMEQFL 447
           VM+K   IVEQ+ +    KK    +TMEQFL
Sbjct: 500 VMQKRKDIVEQF-LLDQQKKKKNMMTMEQFL 529


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