BLASTX nr result
ID: Glycyrrhiza23_contig00034901
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034901 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containin... 179 2e-43 ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containin... 179 3e-43 ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin... 171 4e-41 emb|CBI35338.3| unnamed protein product [Vitis vinifera] 171 4e-41 emb|CAN69414.1| hypothetical protein VITISV_026914 [Vitis vinifera] 171 4e-41 >ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Glycine max] Length = 758 Score = 179 bits (454), Expect = 2e-43 Identities = 84/85 (98%), Positives = 84/85 (98%) Frame = -2 Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78 DNTVKLWDLTAGKLLHDFK HEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA Sbjct: 164 DNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 223 Query: 77 GPETTGVRSLTFSPDGRTLLCGLHE 3 GPETTGVRSLTFSPDGRTLLCGLHE Sbjct: 224 GPETTGVRSLTFSPDGRTLLCGLHE 248 Score = 64.3 bits (155), Expect = 1e-08 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = -2 Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72 T+KLWDL K++ H +DFHP A+GS D +K WD+ I + Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141 Query: 71 ETTGVRSLTFSPDGRTLLCG 12 T GV ++ F+PDGR ++ G Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161 >ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Glycine max] Length = 533 Score = 179 bits (453), Expect = 3e-43 Identities = 83/85 (97%), Positives = 84/85 (98%) Frame = -2 Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78 DNTVKLWDLTAGKLLHDFK HEGQ+QCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA Sbjct: 164 DNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 223 Query: 77 GPETTGVRSLTFSPDGRTLLCGLHE 3 GPETTGVRSLTFSPDGRTLLCGLHE Sbjct: 224 GPETTGVRSLTFSPDGRTLLCGLHE 248 Score = 65.9 bits (159), Expect = 3e-09 Identities = 30/80 (37%), Positives = 43/80 (53%) Frame = -2 Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72 T+KLWDL K++ SH +DFHP A+GS D +K WD+ I + Sbjct: 82 TIKLWDLEEAKIVRTLTSHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141 Query: 71 ETTGVRSLTFSPDGRTLLCG 12 T GV ++ F+PDGR ++ G Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161 >ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Vitis vinifera] Length = 800 Score = 171 bits (434), Expect = 4e-41 Identities = 78/85 (91%), Positives = 83/85 (97%) Frame = -2 Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78 DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA Sbjct: 164 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 223 Query: 77 GPETTGVRSLTFSPDGRTLLCGLHE 3 GPET GVR +TF+PDG+TLLCGLHE Sbjct: 224 GPETAGVRCMTFNPDGKTLLCGLHE 248 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = -2 Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72 T+KLWDL K++ H +DFHP A+GS D +K WD+ I + Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141 Query: 71 ETTGVRSLTFSPDGRTLLCG 12 T GV ++ F+PDGR ++ G Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161 >emb|CBI35338.3| unnamed protein product [Vitis vinifera] Length = 989 Score = 171 bits (434), Expect = 4e-41 Identities = 78/85 (91%), Positives = 83/85 (97%) Frame = -2 Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78 DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA Sbjct: 164 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 223 Query: 77 GPETTGVRSLTFSPDGRTLLCGLHE 3 GPET GVR +TF+PDG+TLLCGLHE Sbjct: 224 GPETAGVRCMTFNPDGKTLLCGLHE 248 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = -2 Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72 T+KLWDL K++ H +DFHP A+GS D +K WD+ I + Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141 Query: 71 ETTGVRSLTFSPDGRTLLCG 12 T GV ++ F+PDGR ++ G Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161 >emb|CAN69414.1| hypothetical protein VITISV_026914 [Vitis vinifera] Length = 606 Score = 171 bits (434), Expect = 4e-41 Identities = 78/85 (91%), Positives = 83/85 (97%) Frame = -2 Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78 DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA Sbjct: 234 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 293 Query: 77 GPETTGVRSLTFSPDGRTLLCGLHE 3 GPET GVR +TF+PDG+TLLCGLHE Sbjct: 294 GPETAGVRCMTFNPDGKTLLCGLHE 318 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = -2 Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72 T+KLWDL K++ H +DFHP A+GS D +K WD+ I + Sbjct: 152 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 211 Query: 71 ETTGVRSLTFSPDGRTLLCG 12 T GV ++ F+PDGR ++ G Sbjct: 212 HTRGVNAIRFTPDGRWVVSG 231