BLASTX nr result

ID: Glycyrrhiza23_contig00034901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034901
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containin...   179   2e-43
ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containin...   179   3e-43
ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   171   4e-41
emb|CBI35338.3| unnamed protein product [Vitis vinifera]              171   4e-41
emb|CAN69414.1| hypothetical protein VITISV_026914 [Vitis vinifera]   171   4e-41

>ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 758

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/85 (98%), Positives = 84/85 (98%)
 Frame = -2

Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78
           DNTVKLWDLTAGKLLHDFK HEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA
Sbjct: 164 DNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 223

Query: 77  GPETTGVRSLTFSPDGRTLLCGLHE 3
           GPETTGVRSLTFSPDGRTLLCGLHE
Sbjct: 224 GPETTGVRSLTFSPDGRTLLCGLHE 248



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%)
 Frame = -2

Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72
           T+KLWDL   K++     H      +DFHP     A+GS D  +K WD+     I +   
Sbjct: 82  TIKLWDLEEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141

Query: 71  ETTGVRSLTFSPDGRTLLCG 12
            T GV ++ F+PDGR ++ G
Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161


>ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 533

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 84/85 (98%)
 Frame = -2

Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78
           DNTVKLWDLTAGKLLHDFK HEGQ+QCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA
Sbjct: 164 DNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 223

Query: 77  GPETTGVRSLTFSPDGRTLLCGLHE 3
           GPETTGVRSLTFSPDGRTLLCGLHE
Sbjct: 224 GPETTGVRSLTFSPDGRTLLCGLHE 248



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/80 (37%), Positives = 43/80 (53%)
 Frame = -2

Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72
           T+KLWDL   K++    SH      +DFHP     A+GS D  +K WD+     I +   
Sbjct: 82  TIKLWDLEEAKIVRTLTSHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141

Query: 71  ETTGVRSLTFSPDGRTLLCG 12
            T GV ++ F+PDGR ++ G
Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161


>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 800

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = -2

Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78
           DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA
Sbjct: 164 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 223

Query: 77  GPETTGVRSLTFSPDGRTLLCGLHE 3
           GPET GVR +TF+PDG+TLLCGLHE
Sbjct: 224 GPETAGVRCMTFNPDGKTLLCGLHE 248



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%)
 Frame = -2

Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72
           T+KLWDL   K++     H      +DFHP     A+GS D  +K WD+     I +   
Sbjct: 82  TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141

Query: 71  ETTGVRSLTFSPDGRTLLCG 12
            T GV ++ F+PDGR ++ G
Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161


>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
          Length = 989

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = -2

Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78
           DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA
Sbjct: 164 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 223

Query: 77  GPETTGVRSLTFSPDGRTLLCGLHE 3
           GPET GVR +TF+PDG+TLLCGLHE
Sbjct: 224 GPETAGVRCMTFNPDGKTLLCGLHE 248



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%)
 Frame = -2

Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72
           T+KLWDL   K++     H      +DFHP     A+GS D  +K WD+     I +   
Sbjct: 82  TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141

Query: 71  ETTGVRSLTFSPDGRTLLCG 12
            T GV ++ F+PDGR ++ G
Sbjct: 142 HTRGVNAIRFTPDGRWVVSG 161


>emb|CAN69414.1| hypothetical protein VITISV_026914 [Vitis vinifera]
          Length = 606

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = -2

Query: 257 DNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSA 78
           DNTVKLWDLTAGKLLHDFKSHEGQ+QCIDFHP+EFLLATGSADRTVKFWDLETFELIGSA
Sbjct: 234 DNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA 293

Query: 77  GPETTGVRSLTFSPDGRTLLCGLHE 3
           GPET GVR +TF+PDG+TLLCGLHE
Sbjct: 294 GPETAGVRCMTFNPDGKTLLCGLHE 318



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%)
 Frame = -2

Query: 251 TVKLWDLTAGKLLHDFKSHEGQIQCIDFHPNEFLLATGSADRTVKFWDLETFELIGSAGP 72
           T+KLWDL   K++     H      +DFHP     A+GS D  +K WD+     I +   
Sbjct: 152 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 211

Query: 71  ETTGVRSLTFSPDGRTLLCG 12
            T GV ++ F+PDGR ++ G
Sbjct: 212 HTRGVNAIRFTPDGRWVVSG 231


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