BLASTX nr result

ID: Glycyrrhiza23_contig00034892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034892
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]    61   1e-07
gb|ABN08665.1| reverse transcriptase - beet retrotransposon, put...    61   1e-07
emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera]    60   1e-07
emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]    60   2e-07
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]    60   2e-07

>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = +1

Query: 37  MKIFSLNTRGIGDWAKRRRIRSALVKGKVECCFLQETKSSNINRNVVDSIWGGGVCNFVS 216
           MKI S NTRG+G   KRR +++ L   K +   +QETK    +R +V S+W     ++ +
Sbjct: 757 MKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVRNKDWAA 816

Query: 217 KDAEGLSGGMIIIW 258
             A G SGG++IIW
Sbjct: 817 LPASGASGGILIIW 830


>gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 152

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%)
 Frame = +1

Query: 37  MKIFSLNTRGIGDWAKRRRIRSALVKGKVECCFLQETKSSNINRNVVDSIWGGGVCNFVS 216
           MKI S+N RG+G   KRR I   + + K+    LQETK   ++  +  SIWG     F  
Sbjct: 1   MKILSVNIRGLGAPEKRREIHRLVAERKLTVLCLQETKLEVVDEFLCRSIWGPTPMAFSF 60

Query: 217 KDAEGLSGGMIIIWYTNVLEVFFS 288
           K + G SGG+I +W  +VL+V+ +
Sbjct: 61  KSSVGASGGIITVWDPSVLDVWMT 84


>emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera]
          Length = 1672

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/80 (40%), Positives = 44/80 (55%)
 Frame = +1

Query: 19  GSKHVSMKIFSLNTRGIGDWAKRRRIRSALVKGKVECCFLQETKSSNINRNVVDSIWGGG 198
           GS    MKI S N RG+G   KRR ++  L     +   +QETK  N +R  V S+W   
Sbjct: 662 GSLCFPMKIISXNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVR 721

Query: 199 VCNFVSKDAEGLSGGMIIIW 258
             ++V+  A G SGG++IIW
Sbjct: 722 NKDWVALPASGASGGILIIW 741


>emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
          Length = 1198

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/76 (43%), Positives = 43/76 (56%)
 Frame = +1

Query: 31  VSMKIFSLNTRGIGDWAKRRRIRSALVKGKVECCFLQETKSSNINRNVVDSIWGGGVCNF 210
           V MKI S NTRG+G   KRR  R  L     +   LQETK    +R  V S+W G   ++
Sbjct: 635 VFMKILSWNTRGLGSRKKRRTXRRFLSTQNPDVVMLQETKREIWDRRSVSSVWKGKSLDW 694

Query: 211 VSKDAEGLSGGMIIIW 258
           V+  A G SGG++I+W
Sbjct: 695 VALPACGASGGIVILW 710


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +1

Query: 37  MKIFSLNTRGIGDWAKRRRIRSALVKGKVECCFLQETKSSNINRNVVDSIWGGGVCNFVS 216
           ++I S N RG  D +KRR I++ +   +V+   LQETK   ++  +V S+  G   N+V+
Sbjct: 690 LRILSWNVRGANDSSKRRXIKAVIRSQRVDLFCLQETKIXXLSEGLVRSLGSGRWXNWVA 749

Query: 217 KDAEGLSGGMIIIWYTNVLEV 279
            DA G +GGM++ W    LEV
Sbjct: 750 LDAVGSAGGMLVCWDKRSLEV 770


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