BLASTX nr result

ID: Glycyrrhiza23_contig00034882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034882
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...    70   1e-10
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...    70   1e-10
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003516334.1| PREDICTED: UPF0503 protein At3g09070, chloro...    65   8e-09

>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/96 (47%), Positives = 46/96 (47%)
 Frame = +1

Query: 1   RRSCDTDPRFSLDAAAMRMSFDGPRYSLDEPRASWDXXXXXXXXXXXXXXXFLRXXXXXX 180
           RRSCDTDPRFSLDA   RMSFD PRYS DEPRASWD               F R      
Sbjct: 335 RRSCDTDPRFSLDAG--RMSFDDPRYSFDEPRASWD--------GYLVSRTFTR------ 378

Query: 181 XXXXXXXXXXXXXXXXXXRTDTQIPVEETPNEVVDD 288
                             RTDTQIPVEE  N   DD
Sbjct: 379 --MPTMLSVVEDAPIHVSRTDTQIPVEEPANSCNDD 412


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/96 (47%), Positives = 46/96 (47%)
 Frame = +1

Query: 1   RRSCDTDPRFSLDAAAMRMSFDGPRYSLDEPRASWDXXXXXXXXXXXXXXXFLRXXXXXX 180
           RRSCDTDPRFSLDA   RMSFD PRYS DEPRASWD               F R      
Sbjct: 328 RRSCDTDPRFSLDAG--RMSFDDPRYSFDEPRASWD--------GYLVSRTFTR------ 371

Query: 181 XXXXXXXXXXXXXXXXXXRTDTQIPVEETPNEVVDD 288
                             RTDTQIPVEE  N   DD
Sbjct: 372 --MPTMLSVVEDAPIHVSRTDTQIPVEEPANSCNDD 405


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 43/90 (47%)
 Frame = +1

Query: 1   RRSCDTDPRFSLDAAAMRMSFDGPRYSLDEPRASWDXXXXXXXXXXXXXXXFLRXXXXXX 180
           RRSCDTDPRFSLDA   R+SFD PRYS DEPRASWD                 R      
Sbjct: 350 RRSCDTDPRFSLDAG--RISFDDPRYSFDEPRASWDGYLIG------------RTFPRMP 395

Query: 181 XXXXXXXXXXXXXXXXXXRTDTQIPVEETP 270
                             R+DTQIPVEE P
Sbjct: 396 TMVSVVEDAPVNVVNVVSRSDTQIPVEEPP 425


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/96 (42%), Positives = 46/96 (47%)
 Frame = +1

Query: 1   RRSCDTDPRFSLDAAAMRMSFDGPRYSLDEPRASWDXXXXXXXXXXXXXXXFLRXXXXXX 180
           RRSCDTDPRFSLDA   R+SFD  RYS DEPRASWD               +L       
Sbjct: 328 RRSCDTDPRFSLDAG--RISFDDSRYSFDEPRASWD--------------GYLIGTRNFP 371

Query: 181 XXXXXXXXXXXXXXXXXXRTDTQIPVEETPNEVVDD 288
                             R+DTQIPVEE  N + +D
Sbjct: 372 RMPTMLSVVEDAPVNVVLRSDTQIPVEEPRNSIHED 407


>ref|XP_003516334.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 606

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/97 (43%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = +1

Query: 1   RRSCDTDPRFSLDAA-----AMRMSFDGPRYSLDEPRASWDXXXXXXXXXXXXXXXFLRX 165
           RRSCDTDPRFSLDA      A RMSFD PRYS++EPRASWD                   
Sbjct: 290 RRSCDTDPRFSLDAGRFSLDAGRMSFDDPRYSIEEPRASWDGYLVGRSAFPRMPTML--- 346

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXRTDTQIPVEETPNE 276
                                  RTD QIPVEE  NE
Sbjct: 347 -----SVVEDAPVPVPVAVNHVVRTDMQIPVEEGSNE 378


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