BLASTX nr result

ID: Glycyrrhiza23_contig00034877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034877
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   176   2e-42
ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   176   2e-42
ref|XP_003588879.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   153   1e-35
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   125   5e-27
ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putat...   117   7e-25

>ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 554

 Score =  176 bits (446), Expect = 2e-42
 Identities = 91/112 (81%), Positives = 95/112 (84%), Gaps = 10/112 (8%)
 Frame = +2

Query: 2   ICSSISCFDHTLLHPQSETGHAVFVDIERAELYCGLCRDQLYDPDFDQIVMSKHSMAV-- 175
           ICSS SC DHTLLHPQSE+GHAVFVDIER ELYCG+CRDQLYDPDFDQ+VMSKHSM V  
Sbjct: 71  ICSSFSCLDHTLLHPQSESGHAVFVDIERTELYCGVCRDQLYDPDFDQVVMSKHSMGVAG 130

Query: 176 ----NESIGQRLIKRRRLVSG-VGLDLHKSK---FTKDLRAKSCYPVGLRGL 307
               NESIGQRLIKRRRLVSG VGLDL KSK    TKDLR KSCYP+GLRGL
Sbjct: 131 GATGNESIGQRLIKRRRLVSGIVGLDLQKSKCRVSTKDLRGKSCYPLGLRGL 182


>ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 555

 Score =  176 bits (445), Expect = 2e-42
 Identities = 91/112 (81%), Positives = 95/112 (84%), Gaps = 10/112 (8%)
 Frame = +2

Query: 2   ICSSISCFDHTLLHPQSETGHAVFVDIERAELYCGLCRDQLYDPDFDQIVMSKHSMAV-- 175
           ICSS SC DHTLLHPQSETGHAVFVDIERAEL+CG+CRDQLYDPDFDQ+VMSKHS+ V  
Sbjct: 72  ICSSFSCLDHTLLHPQSETGHAVFVDIERAELFCGVCRDQLYDPDFDQVVMSKHSLGVAS 131

Query: 176 ----NESIGQRLIKRRRLVSG-VGLDLHKSK---FTKDLRAKSCYPVGLRGL 307
               NESIGQRLIKRRRL SG VGLDL KSK    TKDLR KSCYPVGLRGL
Sbjct: 132 GVTGNESIGQRLIKRRRLASGVVGLDLQKSKCRVSTKDLREKSCYPVGLRGL 183


>ref|XP_003588879.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355477927|gb|AES59130.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 733

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/112 (70%), Positives = 89/112 (79%), Gaps = 10/112 (8%)
 Frame = +2

Query: 2   ICSSISCFDHTLLHPQSETGHAVFVDIERAELYCGLCRDQLYDPDFDQIVMSKHSMAV-- 175
           ICSS  C DHTLLH Q+E GH +FVD+ER ELYCG+C DQ+YDPDFDQ VM+KHSM +  
Sbjct: 72  ICSSFCCLDHTLLHIQTENGHDLFVDVERCELYCGVCCDQIYDPDFDQFVMAKHSMVLPN 131

Query: 176 ----NESIGQRLIKRRRLVSGVGLDL-HKSKF---TKDLRAKSCYPVGLRGL 307
               NESIGQRLIKRRRLVSGVGL L ++SKF   TKDLR KSC+P GLRGL
Sbjct: 132 GVVGNESIGQRLIKRRRLVSGVGLYLQNESKFRFETKDLRGKSCFPEGLRGL 183


>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 552

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/111 (61%), Positives = 79/111 (71%), Gaps = 9/111 (8%)
 Frame = +2

Query: 2   ICSSISCFDHTLLHPQSETGHAVFVDIERAELYCGLCRDQLYDPDFDQIVMSKH------ 163
           IC+SISC +HTLLH QSE GH + VD+ERAELYC  C DQ+YDPDFD+ VMSKH      
Sbjct: 71  ICASISCSNHTLLHYQSENGHDLAVDVERAELYCYACSDQVYDPDFDRTVMSKHIVVPEK 130

Query: 164 SMAVNESIGQRLIKRRRLVSGVGLDLHKSK---FTKDLRAKSCYPVGLRGL 307
           S + +ESIG+R  KRRRL S   LDL   K     KD R+KSCYP+GLRGL
Sbjct: 131 SKSQSESIGERSSKRRRLGSVDLLDLKNLKPLISVKDQRSKSCYPLGLRGL 181


>ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 551

 Score =  117 bits (294), Expect = 7e-25
 Identities = 64/112 (57%), Positives = 79/112 (70%), Gaps = 10/112 (8%)
 Frame = +2

Query: 2   ICSSISCFDHTLLHPQSETGHAVFVDIERAELYCGLCRDQLYDPDFDQIVMSK------- 160
           ICSSISC  HTLLH QSE  H + VDIER+ELYC LC DQ+YDPDFD++V+SK       
Sbjct: 71  ICSSISCSSHTLLHAQSENSHDIAVDIERSELYCSLCSDQVYDPDFDKVVVSKVMLDMPN 130

Query: 161 HSMAVNESIGQRLIKRRRLVSGVGLDLHKSK---FTKDLRAKSCYPVGLRGL 307
           ++  V++ I +R  KRR+L S + LDL KSK     +D R KSCYP+GLRGL
Sbjct: 131 NAHIVDDGI-RRSSKRRKLNSLMELDLKKSKQLVLMRDRREKSCYPLGLRGL 181


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