BLASTX nr result
ID: Glycyrrhiza23_contig00034876
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034876 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi... 105 3e-21 ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 72 5e-11 ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 emb|CBI38550.3| unnamed protein product [Vitis vinifera] 70 1e-10 ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10 >ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Glycine max] Length = 1012 Score = 105 bits (263), Expect = 3e-21 Identities = 52/68 (76%), Positives = 58/68 (85%) Frame = +3 Query: 6 LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185 LS QPEMDR LKLSY+ EAKKLLREMCEKGHVPSESTL+YISSNFS PGK+ DAKRLLK Sbjct: 878 LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKT 937 Query: 186 LFSQKRNS 209 + R++ Sbjct: 938 VIGLYRST 945 >ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1016 Score = 72.0 bits (175), Expect = 5e-11 Identities = 36/68 (52%), Positives = 47/68 (69%) Frame = +3 Query: 6 LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185 LS P++DR LK YRT+AK L+ EM +KG VP +ST+ ISS F+ PGK DA++LLK Sbjct: 880 LSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKE 939 Query: 186 LFSQKRNS 209 +FS S Sbjct: 940 IFSHANKS 947 >ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa] Length = 864 Score = 71.2 bits (173), Expect = 8e-11 Identities = 36/67 (53%), Positives = 47/67 (70%) Frame = +3 Query: 6 LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185 LS QPE+DR K +YRTEA+ L EM EKG VP E+TL ISS F+ PG DAK +LK Sbjct: 798 LSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKD 857 Query: 186 LFSQKRN 206 ++ +K++ Sbjct: 858 MYKRKQS 864 >emb|CBI38550.3| unnamed protein product [Vitis vinifera] Length = 795 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/65 (52%), Positives = 47/65 (72%) Frame = +3 Query: 6 LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185 LS QPE++++LK SY+ EAK+L EM EKG +P E+TL IS + PGKK DA+R+L Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788 Query: 186 LFSQK 200 L+ +K Sbjct: 789 LYKKK 793 >ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Vitis vinifera] Length = 835 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/65 (52%), Positives = 47/65 (72%) Frame = +3 Query: 6 LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185 LS QPE++++LK SY+ EAK+L EM EKG +P E+TL IS + PGKK DA+R+L Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788 Query: 186 LFSQK 200 L+ +K Sbjct: 789 LYKKK 793