BLASTX nr result

ID: Glycyrrhiza23_contig00034876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034876
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...    72   5e-11
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CBI38550.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10

>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
            mitochondrial-like [Glycine max]
          Length = 1012

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = +3

Query: 6    LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185
            LS QPEMDR LKLSY+ EAKKLLREMCEKGHVPSESTL+YISSNFS PGK+ DAKRLLK 
Sbjct: 878  LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKT 937

Query: 186  LFSQKRNS 209
            +    R++
Sbjct: 938  VIGLYRST 945


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/68 (52%), Positives = 47/68 (69%)
 Frame = +3

Query: 6    LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185
            LS  P++DR LK  YRT+AK L+ EM +KG VP +ST+  ISS F+ PGK  DA++LLK 
Sbjct: 880  LSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKE 939

Query: 186  LFSQKRNS 209
            +FS    S
Sbjct: 940  IFSHANKS 947


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +3

Query: 6   LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185
           LS QPE+DR  K +YRTEA+ L  EM EKG VP E+TL  ISS F+ PG   DAK +LK 
Sbjct: 798 LSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKD 857

Query: 186 LFSQKRN 206
           ++ +K++
Sbjct: 858 MYKRKQS 864


>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = +3

Query: 6   LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185
           LS QPE++++LK SY+ EAK+L  EM EKG +P E+TL  IS   + PGKK DA+R+L  
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788

Query: 186 LFSQK 200
           L+ +K
Sbjct: 789 LYKKK 793


>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = +3

Query: 6   LSYQPEMDRALKLSYRTEAKKLLREMCEKGHVPSESTLLYISSNFSIPGKKTDAKRLLKV 185
           LS QPE++++LK SY+ EAK+L  EM EKG +P E+TL  IS   + PGKK DA+R+L  
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788

Query: 186 LFSQK 200
           L+ +K
Sbjct: 789 LYKKK 793


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