BLASTX nr result

ID: Glycyrrhiza23_contig00034870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034870
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   191   5e-47
ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...   179   2e-43
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   174   7e-42
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   173   1e-41
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   167   8e-40

>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/110 (82%), Positives = 102/110 (92%)
 Frame = +2

Query: 2   TLIAIMLIKDIGQAIKSSGLKKLIVFLAPTVHLVNQQYNNIKHQTDLQVEEYYGAKGVDT 181
           TLIA+ML+K++GQAIK+SG+KKLI+FLAPTVHLVNQQ+ NIK  TD QVEEYYGAKGVDT
Sbjct: 93  TLIAVMLMKEVGQAIKTSGVKKLIIFLAPTVHLVNQQFKNIKFLTDFQVEEYYGAKGVDT 152

Query: 182 WNLKTWEKEISDNDVLVMTPQILLDALRKAFLSLEMICLMVIDECHRATG 331
           W LKTWEKEIS+NDVLVMTPQILLDALRKAFL +EMICL+VIDECHR  G
Sbjct: 153 WTLKTWEKEISNNDVLVMTPQILLDALRKAFLRMEMICLIVIDECHRTIG 202


>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 1758

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/110 (81%), Positives = 100/110 (90%)
 Frame = +2

Query: 2   TLIAIMLIKDIGQAIKSSGLKKLIVFLAPTVHLVNQQYNNIKHQTDLQVEEYYGAKGVDT 181
           TLIAI+LIK+ GQAI+SSG+KKLIVFLAPTVHL   Q  NIK  TDLQVEEYYG+KGVDT
Sbjct: 80  TLIAILLIKETGQAIRSSGVKKLIVFLAPTVHL---QCKNIKLNTDLQVEEYYGSKGVDT 136

Query: 182 WNLKTWEKEISDNDVLVMTPQILLDALRKAFLSLEMICLMVIDECHRATG 331
           WNLK+W+KEISDNDV+VMTPQILLDA RKAFLS+EMICLMVIDECH A+G
Sbjct: 137 WNLKSWQKEISDNDVMVMTPQILLDAFRKAFLSIEMICLMVIDECHWASG 186


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/110 (73%), Positives = 97/110 (88%)
 Frame = +2

Query: 2   TLIAIMLIKDIGQAIKSSGLKKLIVFLAPTVHLVNQQYNNIKHQTDLQVEEYYGAKGVDT 181
           T+IA+MLI++IGQA+K+ G K  I+FLAPTVHLVNQQ+  IK  T  +VEEYYGAKGVD 
Sbjct: 73  TMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVNQQFKVIKDSTGFEVEEYYGAKGVDE 132

Query: 182 WNLKTWEKEISDNDVLVMTPQILLDALRKAFLSLEMICLMVIDECHRATG 331
           W+ K+WEKEIS++DVLVMTPQILLDALRKAFLSLE +CLM++DECHRATG
Sbjct: 133 WSAKSWEKEISEHDVLVMTPQILLDALRKAFLSLETVCLMIVDECHRATG 182


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/110 (73%), Positives = 98/110 (89%)
 Frame = +2

Query: 2   TLIAIMLIKDIGQAIKSSGLKKLIVFLAPTVHLVNQQYNNIKHQTDLQVEEYYGAKGVDT 181
           T+IA+MLI++IGQAIKS+  KKLI+FLAPTVHLVNQQY  IK  T+ +V EYYGAKG+D 
Sbjct: 89  TMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLVNQQYEVIKDNTNFKVGEYYGAKGIDG 148

Query: 182 WNLKTWEKEISDNDVLVMTPQILLDALRKAFLSLEMICLMVIDECHRATG 331
           W++K WEKEI+++DVLVMTPQILLDALRKAFL+LEM+ LM+IDECHR TG
Sbjct: 149 WSMKVWEKEINEHDVLVMTPQILLDALRKAFLNLEMVSLMIIDECHRTTG 198


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
           3a-like [Cucumis sativus]
          Length = 1639

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/110 (72%), Positives = 93/110 (84%)
 Frame = +2

Query: 2   TLIAIMLIKDIGQAIKSSGLKKLIVFLAPTVHLVNQQYNNIKHQTDLQVEEYYGAKGVDT 181
           T+IA+MLIK+IG+A+KSS  KKLI+FLAPTVHLV+QQ+N IK  TD +V EYYGA GVD 
Sbjct: 66  TMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVAEYYGAMGVDD 125

Query: 182 WNLKTWEKEISDNDVLVMTPQILLDALRKAFLSLEMICLMVIDECHRATG 331
           WN+  WEKE S+ DVLVMTPQILLDALRKA+  L  ICLM+IDECHRATG
Sbjct: 126 WNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTICLMIIDECHRATG 175


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