BLASTX nr result

ID: Glycyrrhiza23_contig00034867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034867
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596492.1| Cyclic nucleotide-gated ion channel [Medicag...   238   3e-61
ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion chann...   234   7e-60
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   228   3e-58
ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   227   9e-58

>ref|XP_003596492.1| Cyclic nucleotide-gated ion channel [Medicago truncatula]
           gi|355485540|gb|AES66743.1| Cyclic nucleotide-gated ion
           channel [Medicago truncatula]
          Length = 692

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/150 (75%), Positives = 128/150 (85%)
 Frame = -1

Query: 451 RTRMAWAENREARSTCLASPDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 272
           RTR+ W++N EARSTCLAS DNY++G Y+W+VQLVTN+SR+EKIL PIFWGLMTLSTFGN
Sbjct: 298 RTRLVWSQNTEARSTCLASADNYEFGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGN 357

Query: 271 LESTTERIEVVFNXXXXXXXXXXXXXXXGNIKVFLNATASKKQAMKLKMRNIEWWMSKRR 92
           L+STTER+EVVFN               GNIKVFL+AT SKKQAMKLKM N+EWWM+KRR
Sbjct: 358 LQSTTERMEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNMEWWMNKRR 417

Query: 91  LPQGLRQRVRNYERQCWAAMRGVDECQIIK 2
           LPQGLRQRVRNYERQCWAAMRGVDECQ+IK
Sbjct: 418 LPQGLRQRVRNYERQCWAAMRGVDECQLIK 447


>ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 683

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/150 (75%), Positives = 124/150 (82%)
 Frame = -1

Query: 451 RTRMAWAENREARSTCLASPDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 272
           +TR+ WA+NREARSTCL S DNYDYG Y+W+VQLVTNDSRLEKILFPIFWGLMTLSTFGN
Sbjct: 313 KTRLLWAQNREARSTCLDSADNYDYGVYEWSVQLVTNDSRLEKILFPIFWGLMTLSTFGN 372

Query: 271 LESTTERIEVVFNXXXXXXXXXXXXXXXGNIKVFLNATASKKQAMKLKMRNIEWWMSKRR 92
           LEST ER+EV+FN               GNIKVFL++T SKKQAM L+MRNIEWWMSKRR
Sbjct: 373 LESTPERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHSTTSKKQAMLLRMRNIEWWMSKRR 432

Query: 91  LPQGLRQRVRNYERQCWAAMRGVDECQIIK 2
           LPQG RQRVRNYER  WAA RGVDECQ+IK
Sbjct: 433 LPQGFRQRVRNYERMRWAATRGVDECQMIK 462


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  230 bits (587), Expect = 8e-59
 Identities = 113/150 (75%), Positives = 122/150 (81%)
 Frame = -1

Query: 451 RTRMAWAENREARSTCLASPDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 272
           + R AWA+N+ ARS CL SPD YDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN
Sbjct: 265 KARWAWADNKLARSMCLDSPDKYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 324

Query: 271 LESTTERIEVVFNXXXXXXXXXXXXXXXGNIKVFLNATASKKQAMKLKMRNIEWWMSKRR 92
           LESTTE +EVVFN               GNIKVFL+AT SKKQAM+LKMRNIEWWM KR 
Sbjct: 325 LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRH 384

Query: 91  LPQGLRQRVRNYERQCWAAMRGVDECQIIK 2
           LP G RQRVRNYERQ WAAMRGVDEC++I+
Sbjct: 385 LPTGFRQRVRNYERQRWAAMRGVDECEMIR 414


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  228 bits (582), Expect = 3e-58
 Identities = 112/150 (74%), Positives = 122/150 (81%)
 Frame = -1

Query: 451 RTRMAWAENREARSTCLASPDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 272
           R R+AWAENRE R TCL  PDNY+YGAY+W+VQLVTND+RLEKILFPIFWGLMTLSTFGN
Sbjct: 321 RARLAWAENREVRHTCLNGPDNYNYGAYRWSVQLVTNDNRLEKILFPIFWGLMTLSTFGN 380

Query: 271 LESTTERIEVVFNXXXXXXXXXXXXXXXGNIKVFLNATASKKQAMKLKMRNIEWWMSKRR 92
           LESTTE +EVVFN               GNIKVFL+AT SKKQAM+LKMRNIEWWM KRR
Sbjct: 381 LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRR 440

Query: 91  LPQGLRQRVRNYERQCWAAMRGVDECQIIK 2
           LP G RQRVRNYERQ WAAMRGVDE ++ K
Sbjct: 441 LPLGFRQRVRNYERQRWAAMRGVDEFEMTK 470


>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  227 bits (578), Expect = 9e-58
 Identities = 111/150 (74%), Positives = 122/150 (81%)
 Frame = -1

Query: 451 RTRMAWAENREARSTCLASPDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGN 272
           + R+AWAENRE R TCL  PD+Y+YGAY+WTVQLVTND+RLEKILFPIFWGLMTLSTFGN
Sbjct: 320 KARLAWAENREVRHTCLNGPDSYNYGAYRWTVQLVTNDNRLEKILFPIFWGLMTLSTFGN 379

Query: 271 LESTTERIEVVFNXXXXXXXXXXXXXXXGNIKVFLNATASKKQAMKLKMRNIEWWMSKRR 92
           LESTTE +EVVFN               GNIKVFL+AT SKKQAM+LKMRNIEWWM KRR
Sbjct: 380 LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRR 439

Query: 91  LPQGLRQRVRNYERQCWAAMRGVDECQIIK 2
           LP G RQRVRNYERQ WAAMRGVDE ++ K
Sbjct: 440 LPLGFRQRVRNYERQRWAAMRGVDEFEMTK 469


Top