BLASTX nr result

ID: Glycyrrhiza23_contig00034864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034864
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   157   7e-37
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   157   7e-37
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       135   3e-30
gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymera...   133   1e-29
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   116   2e-24

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/103 (72%), Positives = 89/103 (86%)
 Frame = +2

Query: 2    LQEDVYMVVPQGVSCSKPNQVCKLHKSLYGLRQASRKWYEKLTHLLLLNGYKQSNADHSL 181
            LQEDVYM +P GV+C+KPN VCKL KSLYGL+QASRKWYEKLT+LLL  GY QS +D+SL
Sbjct: 1022 LQEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSL 1081

Query: 182  FVLSNGNDFTALLVYVDDVILAGNSLTEFSRIKSILDSSFKIK 310
            F L+ GN FTALLVYVDD+ILAG+S+ EF RIK++LD +FKIK
Sbjct: 1082 FTLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIK 1124


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/103 (72%), Positives = 89/103 (86%)
 Frame = +2

Query: 2    LQEDVYMVVPQGVSCSKPNQVCKLHKSLYGLRQASRKWYEKLTHLLLLNGYKQSNADHSL 181
            LQEDVYM +P GV+C+KPN VCKL KSLYGL+QASRKWYEKLT+LLL  GY QS +D+SL
Sbjct: 858  LQEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSL 917

Query: 182  FVLSNGNDFTALLVYVDDVILAGNSLTEFSRIKSILDSSFKIK 310
            F L+ GN FTALLVYVDD+ILAG+S+ EF RIK++LD +FKIK
Sbjct: 918  FTLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIK 960


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/103 (66%), Positives = 79/103 (76%)
 Frame = +2

Query: 2   LQEDVYMVVPQGVSCSKPNQVCKLHKSLYGLRQASRKWYEKLTHLLLLNGYKQSNADHSL 181
           LQE+VY  +P G+S  KPNQVCKL KSLYGL+QASRKWYEKLT LL+ N YKQ+ +D SL
Sbjct: 218 LQENVYKKIPPGLSTFKPNQVCKLSKSLYGLKQASRKWYEKLTTLLISNDYKQAASDASL 277

Query: 182 FVLSNGNDFTALLVYVDDVILAGNSLTEFSRIKSILDSSFKIK 310
           F       FT +LVYVDD+ILAGNSLTEF  IK+ L  +FKIK
Sbjct: 278 FTKLTSETFTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIK 320


>gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymerase) [Medicago
           truncatula]
          Length = 293

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/103 (62%), Positives = 83/103 (80%)
 Frame = +2

Query: 2   LQEDVYMVVPQGVSCSKPNQVCKLHKSLYGLRQASRKWYEKLTHLLLLNGYKQSNADHSL 181
           LQEDVYM++P GV  S  ++VCKL+KSLYGL+QAS KWYEKLT++L+  GYKQ+ +D SL
Sbjct: 103 LQEDVYMIIPPGVPHSHQDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASL 162

Query: 182 FVLSNGNDFTALLVYVDDVILAGNSLTEFSRIKSILDSSFKIK 310
           F+    + FT LLVYVDDVILAG++L+EF+ IK +L  +FKIK
Sbjct: 163 FIKHTHSSFTILLVYVDDVILAGDTLSEFNTIKGVLHDAFKIK 205


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2    LQEDVYMVVPQGV--SCSKPNQVCKLHKSLYGLRQASRKWYEKLTHLLLLNGYKQSNADH 175
            L E+VYM +P G     S  N+VCKLHKSLYGL+QASR+W+ KL+  L+  GY  S+ADH
Sbjct: 1294 LDEEVYMDLPPGFLPPGSSSNKVCKLHKSLYGLKQASRQWFSKLSTALISLGYSPSSADH 1353

Query: 176  SLFVLSNGNDFTALLVYVDDVILAGNSLTEFSRIKSILDSSFKIK 310
            SLF   + + FTALLVYVD+++L G+ L E   +K  LDS+FKIK
Sbjct: 1354 SLFTKLHNSHFTALLVYVDNIVLTGDDLQEIQSVKQFLDSTFKIK 1398


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