BLASTX nr result

ID: Glycyrrhiza23_contig00034860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034860
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago ...    64   1e-08
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    62   4e-08
ref|XP_002303832.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    59   5e-07

>ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago truncatula]
           gi|355525016|gb|AET05470.1| hypothetical protein
           MTR_8g105950 [Medicago truncatula]
          Length = 245

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/77 (45%), Positives = 44/77 (57%)
 Frame = -3

Query: 282 DLLATTNTLHPLFPLLAYINHLLARDWNVQLQHNFHEGNACADWLAKTGANCDSPLVIWD 103
           D +   N  H    L+  I HLL RDW V L+H F EGN   D+LAK GA  DS LVI +
Sbjct: 166 DEMLYLNVHHKYENLIIAIKHLLRRDWVVSLRHTFREGNVVVDFLAKEGALSDSSLVILN 225

Query: 102 QSPYQXXXXXLADALGL 52
           ++P       LADA+G+
Sbjct: 226 EAPPNITSVLLADAIGV 242


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -3

Query: 288 ALDLLATTNTL-HPLFPLLAYINHLLARDWNVQLQHNFHEGNACADWLAKTGANCDSPLV 112
           ALDL+   +T  HP   +L  I  L++RDW++   H   EGN CADWLAK  A  D  L 
Sbjct: 85  ALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTLREGNECADWLAKYDAQSDVSLK 144

Query: 111 IWDQSPYQXXXXXLADA 61
           +W   P Q     LADA
Sbjct: 145 LWVSPPPQFAHVLLADA 161


>ref|XP_002303832.1| predicted protein [Populus trichocarpa] gi|222841264|gb|EEE78811.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/76 (38%), Positives = 43/76 (56%)
 Frame = -3

Query: 279 LLATTNTLHPLFPLLAYINHLLARDWNVQLQHNFHEGNACADWLAKTGANCDSPLVIWDQ 100
           L A     H    L   I  LL+RDW V+++H F + N CAD++AK   +CD+ L+IWD+
Sbjct: 23  LFANQVGFHKYRALTFEIRELLSRDWTVRIEHTFRKANFCADFMAKFATSCDNGLMIWDE 82

Query: 99  SPYQXXXXXLADALGL 52
            P       LA+ +G+
Sbjct: 83  PPQGLQQLLLANIMGI 98


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
            predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = -3

Query: 240  LLAYINHLLARDWNVQLQHNFHEGNACADWLAKTGANCDSPLVIWDQSPYQXXXXXLADA 61
            L+  I  LL RDW V+++H F E N CAD++AK   +CD+ L+IWD+ P       LAD 
Sbjct: 984  LIFEIRELLRRDWTVRIEHTFREANFCADFMAKLATSCDNGLMIWDEPPQGLQQLLLADI 1043

Query: 60   L 58
            +
Sbjct: 1044 M 1044


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/71 (46%), Positives = 42/71 (59%)
 Frame = -3

Query: 264 NTLHPLFPLLAYINHLLARDWNVQLQHNFHEGNACADWLAKTGANCDSPLVIWDQSPYQX 85
           N  H    L+  I  LL RDW V L+H   EGNA AD+LAK GA  D+ LVI +++P   
Sbjct: 160 NVHHKYGNLIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVILNEAPPDI 219

Query: 84  XXXXLADALGL 52
               LADA+G+
Sbjct: 220 AFVLLADAVGV 230


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