BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034851
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003612489.1| Pentatricopeptide repeat-containing protein ...   153   1e-35
emb|CBI29194.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002867948.1| pentatricopeptide repeat-containing protein ...   107   1e-21

>ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   SALSHNRESREALELFCRLQFKPNEFTIVSVLSACTQIGILRHGKQVHAHVFMSGIQENS 181
           SALSHNRESREALELF  LQF+PNE TI+ VLSACTQIG+LRHGKQVHAHVF + IQ+NS
Sbjct: 676 SALSHNRESREALELFLNLQFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNS 735

Query: 182 FISAVLLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMIA 298
           FISA L+DLYS+CGRLDTA QVFRH++EKSESAWN+MI+
Sbjct: 736 FISAALIDLYSNCGRLDTALQVFRHAKEKSESAWNSMIS 774



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
 Frame = +2

Query: 2   SALSHNRESREALELFCR-LQFKPN--EFTIVSVLSACTQIGI--LRHGKQVHAHVFMSG 166
           S  SHNR S EA  LF   L++ PN    T+ ++LS+C  + I  +  GK VH     SG
Sbjct: 470 SGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSG 529

Query: 167 IQENSFISAVLLDLYSSCGRLDTAHQVFRHSEEKSE-SAWNTMI 295
              +  +  +L+ +Y +CG L  +  +   +   ++ ++WNT+I
Sbjct: 530 FLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLI 573


>ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513824|gb|AES95447.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = +2

Query: 2   SALSHNRESREALELFCRLQFKPNEFTIVSVLSACTQIGILRHGKQVHAHVFMSGIQENS 181
           SALSHN+ESREALELF  LQFKPNEFTIVSVLSACT+IG+L HGKQVH + F  G Q+NS
Sbjct: 684 SALSHNKESREALELFRHLQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNS 743

Query: 182 FISAVLLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMIA 298
           FISA L+DLYS+CGRLD A +VFRHS +KSESAWN+MIA
Sbjct: 744 FISAALVDLYSTCGRLDNAVKVFRHS-QKSESAWNSMIA 781



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
 Frame = +2

Query: 14  HNRESREALELFCRLQFKPNEFTIVSV---LSACTQIGILRHGKQVHAHVFMSGIQENSF 184
           +N +  ++L  F R+ F       VS+   +SAC+ +G L  G+ +H      G ++NSF
Sbjct: 278 YNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSF 337

Query: 185 ISAV--LLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMI 295
           +S    L+ LYS C  +D A  VFR    K   +WN M+
Sbjct: 338 VSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMM 376


>emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/99 (62%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   SALSHNRESREALELFCRLQFKPNEFTIVSVLSACTQIGILRHGKQVHAHVFMSGIQENS 181
           SA S N++ R ALELFC ++F+PNE TIV +LSACTQ+G+LRHGKQ+H HV  S +Q NS
Sbjct: 575 SAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNS 634

Query: 182 FISAVLLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMIA 298
           F+SA L D+YS+CGRLDTA Q+F+ S E+S +AWN+MI+
Sbjct: 635 FVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMIS 673


>ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/99 (62%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   SALSHNRESREALELFCRLQFKPNEFTIVSVLSACTQIGILRHGKQVHAHVFMSGIQENS 181
           SA S N++ R ALELFC ++F+PNE TIV +LSACTQ+G+LRHGKQ+H HV  S +Q NS
Sbjct: 556 SAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNS 615

Query: 182 FISAVLLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMIA 298
           F+SA L D+YS+CGRLDTA Q+F+ S E+S +AWN+MI+
Sbjct: 616 FVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMIS 654


>ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313784|gb|EFH44207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 919

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/99 (51%), Positives = 68/99 (68%)
 Frame = +2

Query: 2   SALSHNRESREALELFCRLQFKPNEFTIVSVLSACTQIGILRHGKQVHAHVFMSGIQENS 181
           SALS N+  RE  +LF  L+ +PNE T V +LSA TQ+G   +G Q H H+   G Q N 
Sbjct: 645 SALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP 704

Query: 182 FISAVLLDLYSSCGRLDTAHQVFRHSEEKSESAWNTMIA 298
           F+SA L+D+YSSCG L+T  +VFR+S  KS SAWN++I+
Sbjct: 705 FVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVIS 743