BLASTX nr result

ID: Glycyrrhiza23_contig00034834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034834
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...   118   4e-25
ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...   107   1e-21
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...    99   3e-19
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    99   3e-19
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score =  118 bits (296), Expect = 4e-25
 Identities = 66/91 (72%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = +2

Query: 23  ISPS-PRKL-EHRTVEXXXXXXXXXVISMGDECIDIRAKDEQFSVQPIRRSFSMDSSGDR 196
           ISPS PRKL EHR V+         V SMGDECIDIRAKD+QFSVQPIRRSFSMDSSGDR
Sbjct: 248 ISPSSPRKLLEHRNVQKKKTMKLQKVTSMGDECIDIRAKDDQFSVQPIRRSFSMDSSGDR 307

Query: 197 QFYLAVQEALQQLKREAKEAFSSIEGCSGSG 289
           QFYLAVQEAL+   R+  E  +SIEGCSGSG
Sbjct: 308 QFYLAVQEALRHQNRQVNEV-NSIEGCSGSG 337


>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score =  107 bits (266), Expect = 1e-21
 Identities = 63/92 (68%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
 Frame = +2

Query: 23  ISPS-PRKL-EHRTVEXXXXXXXXXVISMGDECIDIRAKDEQF-SVQPIRRSFSMDSSGD 193
           ISPS PRKL EHR V+         V SMGDECIDIRAKD+QF SVQPIRRSFSMDSSGD
Sbjct: 250 ISPSSPRKLLEHRNVQKKKAMKLQKVTSMGDECIDIRAKDDQFFSVQPIRRSFSMDSSGD 309

Query: 194 RQFYLAVQEALQQLKREAKEAFSSIEGCSGSG 289
           R+FYLAVQEAL+    +  E  +SIEGCSG G
Sbjct: 310 RRFYLAVQEALRNQNWQVNEV-NSIEGCSGIG 340


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/90 (62%), Positives = 60/90 (66%)
 Frame = +2

Query: 11  SSDLISPSPRKLEHRTVEXXXXXXXXXVISMGDECIDIRAKDEQFSVQPIRRSFSMDSSG 190
           S+  ISPSPRKLE R V          V SMGDECID R KD+QFS+QPIRRSFSMDSS 
Sbjct: 246 SAPSISPSPRKLEQRIVPKKARKFHH-VASMGDECIDTRGKDDQFSIQPIRRSFSMDSSN 304

Query: 191 DRQFYLAVQEALQQLKREAKEAFSSIEGCS 280
           DRQ YLA+QE LQQ        FS  EGCS
Sbjct: 305 DRQLYLAIQEILQQ--NRPVSDFSPSEGCS 332


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/90 (62%), Positives = 60/90 (66%)
 Frame = +2

Query: 11  SSDLISPSPRKLEHRTVEXXXXXXXXXVISMGDECIDIRAKDEQFSVQPIRRSFSMDSSG 190
           S+  ISPSPRKLE R V          V SMGDECID R KD+QFS+QPIRRSFSMDSS 
Sbjct: 306 SAPSISPSPRKLEQRIVPKKARKFHH-VASMGDECIDTRGKDDQFSIQPIRRSFSMDSSN 364

Query: 191 DRQFYLAVQEALQQLKREAKEAFSSIEGCS 280
           DRQ YLA+QE LQQ        FS  EGCS
Sbjct: 365 DRQLYLAIQEILQQ--NRPVSDFSPSEGCS 392


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +2

Query: 11  SSDLISPSPRKLEHRTVEXXXXXXXXXVISMGDECIDIRAKDEQFS-VQPIRRSFSMDSS 187
           S+  ISPSPRK+E + V          V SMGDECID R KD+QF  +QPIRRSFSMDSS
Sbjct: 226 SARSISPSPRKIE-QGVGHKKARNLNKVTSMGDECIDTRGKDDQFGLIQPIRRSFSMDSS 284

Query: 188 GDRQFYLAVQEALQQLKREAKEAFSSIEGCSG 283
            DRQ YL++QE +QQ  R+  E  SS+EGCSG
Sbjct: 285 ADRQLYLSIQEIVQQ-SRQVTEV-SSVEGCSG 314


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