BLASTX nr result

ID: Glycyrrhiza23_contig00034827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034827
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522397.1| PREDICTED: putative pentatricopeptide repeat...    99   5e-19
ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago ...    98   6e-19
ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat...    94   9e-18
emb|CBI14973.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat...    74   1e-11

>ref|XP_003522397.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Glycine max]
          Length = 279

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = +2

Query: 2   LAQQLFESNPTDNAYRVMLSNIYASDGRWDDVKKLRDKMTGDMIKMPGVSWIEGS 166
           +AQQLFES+P DN Y VMLSNIYA DGRWDDVKKLRDKMTG + KMPG+SWIEGS
Sbjct: 225 VAQQLFESSPADNVYSVMLSNIYAGDGRWDDVKKLRDKMTGGLRKMPGLSWIEGS 279


>ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
           gi|355490254|gb|AES71457.1| hypothetical protein
           MTR_3g077200 [Medicago truncatula]
          Length = 553

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/56 (80%), Positives = 48/56 (85%)
 Frame = +2

Query: 2   LAQQLFESNPTDNAYRVMLSNIYASDGRWDDVKKLRDKMTGDMIKMPGVSWIEGSY 169
           +AQQ+F+SNP DN YRVMLSNIYA DGRWDDVKKLRDKM G   KM GVSWIEGSY
Sbjct: 497 VAQQIFKSNPADNVYRVMLSNIYAGDGRWDDVKKLRDKMVGGQKKMRGVSWIEGSY 552


>ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Glycine max]
          Length = 551

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +2

Query: 2   LAQQLFESNPTDNAYRVMLSNIYASDGRWDDVKKLRDKMTGDMIKMPGVSWIEGS 166
           +A QLFES+P DN YRVMLSNIYA DGRWDDVKKLRD MTG   KMPG+SWI+GS
Sbjct: 497 VAHQLFESSPADNVYRVMLSNIYAGDGRWDDVKKLRDNMTGGPRKMPGLSWIDGS 551


>emb|CBI14973.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   LAQQLFESNPTDNAYRVMLSNIYASDGRWDDVKKLRDKM-TGDMIKMPGVSWI 157
           +AQQLFE+ P  +AYRVMLSNIYA D RWDDVKKLRD +    + KMPG+SWI
Sbjct: 447 VAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGIKKMPGLSWI 499


>ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Vitis vinifera]
          Length = 560

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   LAQQLFESNPTDNAYRVMLSNIYASDGRWDDVKKLRDKM-TGDMIKMPGVSWI 157
           +AQQLFE+ P  +AYRVMLSNIYA D RWDDVKKLRD +    + KMPG+SWI
Sbjct: 503 VAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGIKKMPGLSWI 555


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