BLASTX nr result

ID: Glycyrrhiza23_contig00034826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034826
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...   233   2e-59
ref|XP_003555697.1| PREDICTED: uncharacterized protein LOC100798...   214   8e-54
ref|NP_001238217.1| DNA mismatch repair protein [Glycine max] gi...   212   2e-53
gb|AAX31514.1| DNA mismatch repair protein [Phaseolus vulgaris]       206   2e-51
gb|ABA29739.1| DNA mismatch repair protein [Phaseolus vulgaris]       204   6e-51

>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/129 (88%), Positives = 119/129 (92%)
 Frame = +3

Query: 3    LVLVDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLNINNTVYKAMGT 182
            LVLVDEICRGTETAKGTCIAGSIIETLD+ GCLGIVSTHLH IFTLPLNI NTV+KAMGT
Sbjct: 936  LVLVDEICRGTETAKGTCIAGSIIETLDRSGCLGIVSTHLHDIFTLPLNITNTVHKAMGT 995

Query: 183  TCIDGQTKPTWKLTDGVCKESLAFETAKREGIPETIINRAEDLYLSVFAKKLLSEENFTK 362
            TCIDGQTKPTW LTDGVCKESLAFETAKREGIPE II RAEDLYLSV+AKK LS EN+ K
Sbjct: 996  TCIDGQTKPTWMLTDGVCKESLAFETAKREGIPEIIIQRAEDLYLSVYAKKTLSAENYAK 1055

Query: 363  QEEFSTYIN 389
            QEE S+YIN
Sbjct: 1056 QEELSSYIN 1064


>ref|XP_003555697.1| PREDICTED: uncharacterized protein LOC100798513 [Glycine max]
          Length = 1134

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/131 (80%), Positives = 119/131 (90%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3    LVLVDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLNINNTVYKAMGT 182
            LVL+DEICRGTETAKGTCIAGSIIETLD+IGCLGIVSTHLHGIFTLPLNINNTV+KAMGT
Sbjct: 845  LVLIDEICRGTETAKGTCIAGSIIETLDRIGCLGIVSTHLHGIFTLPLNINNTVHKAMGT 904

Query: 183  TCIDGQTKPTWKLTDGVCKESLAFETAKREGIPETIINRAEDLYLSVFA--KKLLSEENF 356
            T IDGQT PTWKLTDGVC+ESLAFETA+REG+PE II RAE +Y SV+A  K+LLS E  
Sbjct: 905  TSIDGQTIPTWKLTDGVCRESLAFETARREGVPELIIRRAEYIYQSVYAKEKELLSAEKS 964

Query: 357  TKQEEFSTYIN 389
            + ++++STYIN
Sbjct: 965  SNEKKYSTYIN 975


>ref|NP_001238217.1| DNA mismatch repair protein [Glycine max] gi|61696669|gb|AAX53095.1|
            DNA mismatch repair protein [Glycine max]
          Length = 1130

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/129 (82%), Positives = 113/129 (87%)
 Frame = +3

Query: 3    LVLVDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLNINNTVYKAMGT 182
            LVLVDEICRGTETAKGTCIAGSIIETLD IGCLGIVSTHLHGIFTLPLN  NTV+KAMGT
Sbjct: 843  LVLVDEICRGTETAKGTCIAGSIIETLDGIGCLGIVSTHLHGIFTLPLNKKNTVHKAMGT 902

Query: 183  TCIDGQTKPTWKLTDGVCKESLAFETAKREGIPETIINRAEDLYLSVFAKKLLSEENFTK 362
            T IDGQ  PTWKLTDGVCKESLAFETAKREGIPE I+ RAE LY  V+AK++L  ENF  
Sbjct: 903  TSIDGQIMPTWKLTDGVCKESLAFETAKREGIPEHIVRRAEYLYQLVYAKEMLFAENFPN 962

Query: 363  QEEFSTYIN 389
            +E+FST IN
Sbjct: 963  EEKFSTCIN 971


>gb|AAX31514.1| DNA mismatch repair protein [Phaseolus vulgaris]
          Length = 1126

 Score =  206 bits (523), Expect = 2e-51
 Identities = 104/129 (80%), Positives = 112/129 (86%)
 Frame = +3

Query: 3    LVLVDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLNINNTVYKAMGT 182
            LVLVDEICRGTETAKGTCIAGSIIETL++IGCLG+VSTHLHGIFTLPLNI +TV+KAMGT
Sbjct: 844  LVLVDEICRGTETAKGTCIAGSIIETLERIGCLGVVSTHLHGIFTLPLNIKSTVHKAMGT 903

Query: 183  TCIDGQTKPTWKLTDGVCKESLAFETAKREGIPETIINRAEDLYLSVFAKKLLSEENFTK 362
            TCIDGQ  PTWKLTDGVCKESLAFETA REGIPE II RAE LY SV+A     EENF  
Sbjct: 904  TCIDGQILPTWKLTDGVCKESLAFETAIREGIPEPIIRRAECLYKSVYA-----EENFPN 958

Query: 363  QEEFSTYIN 389
            +E+FST  N
Sbjct: 959  EEKFSTCNN 967


>gb|ABA29739.1| DNA mismatch repair protein [Phaseolus vulgaris]
          Length = 1126

 Score =  204 bits (519), Expect = 6e-51
 Identities = 103/129 (79%), Positives = 111/129 (86%)
 Frame = +3

Query: 3    LVLVDEICRGTETAKGTCIAGSIIETLDKIGCLGIVSTHLHGIFTLPLNINNTVYKAMGT 182
            LVLVDEICRGTETAKGTCIAGSIIETL++IGCLG+VSTHLHGIFTLPLNI +TV+KAMGT
Sbjct: 844  LVLVDEICRGTETAKGTCIAGSIIETLERIGCLGVVSTHLHGIFTLPLNIKSTVHKAMGT 903

Query: 183  TCIDGQTKPTWKLTDGVCKESLAFETAKREGIPETIINRAEDLYLSVFAKKLLSEENFTK 362
            TCIDGQ  PTWKLTDGVCKESL FETA REGIPE II RAE LY SV+A     EENF  
Sbjct: 904  TCIDGQILPTWKLTDGVCKESLTFETAIREGIPEPIIRRAECLYKSVYA-----EENFPN 958

Query: 363  QEEFSTYIN 389
            +E+FST  N
Sbjct: 959  EEKFSTCNN 967


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