BLASTX nr result

ID: Glycyrrhiza23_contig00034824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034824
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15...   239   1e-61
ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 hom...   220   8e-56
ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   139   2e-31
emb|CBI39437.3| unnamed protein product [Vitis vinifera]              139   3e-31

>ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15 [Medicago truncatula]
           gi|355496748|gb|AES77951.1| Coiled-coil
           domain-containing protein MTMR15 [Medicago truncatula]
          Length = 922

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/134 (87%), Positives = 125/134 (93%)
 Frame = +2

Query: 2   KNAQHVVEFSIRNPSSVKYQLNFCLMLQEVLRNNNHLLTEDEKTYMESFTSLSNDSQRLF 181
           K A+HVVE +I+NPSSVKYQ+NFCLMLQEVLRNN HLLTEDEKTY ESFTS SNDSQRLF
Sbjct: 293 KKARHVVESAIKNPSSVKYQMNFCLMLQEVLRNNIHLLTEDEKTYTESFTSFSNDSQRLF 352

Query: 182 IRLYTRKGPWFRMSCISYPEIMDAQTSVKELAEKEYICSVEDGNQLCESDMNDILNVLTV 361
           +RLYTRKGPWFRMS ISYPEI DAQ +VKELAEKEYICS+EDGNQLCESDMNDIL+VLTV
Sbjct: 353 LRLYTRKGPWFRMSSISYPEIFDAQKAVKELAEKEYICSLEDGNQLCESDMNDILDVLTV 412

Query: 362 SELREIWCFLLKKS 403
           SELREIW FLLKKS
Sbjct: 413 SELREIWSFLLKKS 426


>ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 homolog [Glycine max]
          Length = 981

 Score =  220 bits (561), Expect = 8e-56
 Identities = 112/135 (82%), Positives = 120/135 (88%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   KNAQHVVEFSIRNP-SSVKYQLNFCLMLQEVLRNNNHLLTEDEKTYMESFTSLSNDSQRL 178
           KNAQ VVEF+ RNP SSVKYQLNF LML EVLRNN HLLTEDEKTYMESFT LSNDSQRL
Sbjct: 361 KNAQRVVEFASRNPPSSVKYQLNFGLMLHEVLRNNIHLLTEDEKTYMESFTLLSNDSQRL 420

Query: 179 FIRLYTRKGPWFRMSCISYPEIMDAQTSVKELAEKEYICSVEDGNQLCESDMNDILNVLT 358
           FIRLYTRKGPWFRMS ISYPEI+D Q +VK LAEKEYI S+ED N+LCESD+NDILN+L+
Sbjct: 421 FIRLYTRKGPWFRMSNISYPEIVDTQKAVKGLAEKEYIHSIEDANKLCESDLNDILNILS 480

Query: 359 VSELREIWCFLLKKS 403
           V ELREIWC LLKKS
Sbjct: 481 VCELREIWCILLKKS 495


>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/128 (60%), Positives = 100/128 (78%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   KNAQHVVEFSIRN--PSSVKYQLNFCLMLQEVLRNNNHLLTEDEKTYMESFTSLSNDSQR 175
           KN  HV E S +N  PS  KYQ NF +++QEVL++N HL T DEK ++ESF SLS+DSQR
Sbjct: 386 KNVLHVAE-SAKNYPPSMTKYQQNFWVLIQEVLKSNPHLFTNDEKMFLESFISLSDDSQR 444

Query: 176 LFIRLYTRKGPWFRMSCISYPEIMDAQTSVKELAEKEYICSVEDGNQLCESDMNDILNVL 355
           LF+RLYTRKGPWFRMS ISYPE+ D+Q ++K+L+   Y+CS +  ++L E+DM  ILN+L
Sbjct: 445 LFVRLYTRKGPWFRMSNISYPEVTDSQQAIKDLSAMGYMCSFKGVDELQENDMEKILNLL 504

Query: 356 TVSELREI 379
           TVSELREI
Sbjct: 505 TVSELREI 512


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/120 (55%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
 Frame = +2

Query: 41  PSSVKYQLNFCLMLQEVLRNNNHLLTEDEKTYMESFTSLSNDSQRLFIRLYTRKGPWFRM 220
           PS  KYQ NFC ++QEVL +N HL T+DEK ++ SFTSLS+D QR+F+RLYTRKGPWFRM
Sbjct: 345 PSIAKYQRNFCFLIQEVLASNPHLFTDDEKIFLGSFTSLSDDCQRIFVRLYTRKGPWFRM 404

Query: 221 SCISYPEIMDAQTSVKELAEKEYICSVEDGNQLCES-DMNDILNVLTVSELREIWCFLLK 397
             ISYPE++D++ +V+ L++  YICS +   +  ++ DM ++LN+LTVSELREI   ++K
Sbjct: 405 CNISYPEVLDSKQAVRGLSDAGYICSSQSMIEPHDNGDMKEVLNLLTVSELREISSAVMK 464


>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/114 (57%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
 Frame = +2

Query: 41  PSSVKYQLNFCLMLQEVLRNNNHLLTEDEKTYMESFTSLSNDSQRLFIRLYTRKGPWFRM 220
           PS  KYQ NFC ++QEVL +N HL T+DEK ++ SFTSLS+D QR+F+RLYTRKGPWFRM
Sbjct: 342 PSIAKYQRNFCFLIQEVLASNPHLFTDDEKIFLGSFTSLSDDCQRIFVRLYTRKGPWFRM 401

Query: 221 SCISYPEIMDAQTSVKELAEKEYICSVEDGNQLCES-DMNDILNVLTVSELREI 379
             ISYPE++D++ +V+ L++  YICS +   +  ++ DM ++LN+LTVSELREI
Sbjct: 402 CNISYPEVLDSKQAVRGLSDAGYICSSQSMIEPHDNGDMKEVLNLLTVSELREI 455


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