BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034812
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...    66   3e-09
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...    65   4e-09

>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/82 (51%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -1

Query: 244 MSFYSIKKTQEXXXXXXXXXXXXXXXXSYHSFATQQIPQHNPFPSKDQVDPFPPSPTS-Y 68
           MSFYSIKKTQ                  YHS AT Q            VD FPP PT+ Y
Sbjct: 1   MSFYSIKKTQHTSFIFNLFPFSQSF---YHSLATHQTAS---------VDSFPPQPTTHY 48

Query: 67  CYTSLLQSCIAAKALRPGKQLH 2
            YTSLLQSCI +KAL PGKQLH
Sbjct: 49  GYTSLLQSCIDSKALNPGKQLH 70


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
 Frame = -1

Query: 244 MSFYSIKKTQEXXXXXXXXXXXXXXXXS------YHSFATQQIPQHNPFPSKDQVDPFPP 83
           MSF SI+KTQE                       + SFATQ IPQH       +VD FP 
Sbjct: 1   MSFSSIRKTQETSRILSILSFSLNLFPVSPYYFLHQSFATQLIPQH-------KVDSFPS 53

Query: 82  SPTS-YCYTSLLQSCIAAKALRPGKQLH 2
           SP++ Y Y SLL+SCI+AKAL PGKQLH
Sbjct: 54  SPSNHYYYASLLESCISAKALEPGKQLH 81