BLASTX nr result

ID: Glycyrrhiza23_contig00034758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034758
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   160   8e-38
ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...   137   1e-30
ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              108   6e-22

>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/85 (88%), Positives = 83/85 (97%)
 Frame = +3

Query: 3   ASHAKSLHSLDLSWCRNLTNNALGLIVDSCLSLRLLKLFGCTQVTDAFLNGHSNLQIQII 182
           A+HAK+LHSLDLSWCRNLT+NALGLIVDSCL+LR LKLFGC+QVTDAFLNGHSNLQIQII
Sbjct: 451 ANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRSLKLFGCSQVTDAFLNGHSNLQIQII 510

Query: 183 GSKMSPILQHVRVPDPHQGALNYSS 257
           G KMSP+L+HV+VPDPHQGALNYSS
Sbjct: 511 GLKMSPVLEHVKVPDPHQGALNYSS 535


>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   ASHAKSLHSLDLSWCRNLTNNALGLIVDSCLSLRLLKLFGCTQVTDAFLNGHSNLQIQII 182
           A HAK+LH+LDLSWCRNLT+N LG IVDSC SLRLLKLFGC+ VTD FLNGHSN +IQI+
Sbjct: 585 ARHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEIQIL 644

Query: 183 GSKMSPILQHVRVPDPHQGALNYS 254
           G KMSP+LQ+V+VP+P+QG L YS
Sbjct: 645 GLKMSPLLQNVKVPEPYQGPLRYS 668


>ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|222833315|gb|EEE71792.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = +3

Query: 3   ASHAKSLHSLDLSWCRNLTNNALGLIVDSCLSLRLLKLFGCTQVTDAFLNGHSNLQIQII 182
           A  ++ L SLDLSWCRNLTN ALGLIVDSCLSL++LKLFGC+QVT+ FL+GHSN  +QII
Sbjct: 170 ARRSRKLLSLDLSWCRNLTNEALGLIVDSCLSLKVLKLFGCSQVTNVFLDGHSNSDVQII 229

Query: 183 GSKMSPILQHVRVPDPHQGALNYSS 257
           G K SP+L+H+RVP+  + AL YSS
Sbjct: 230 GLKTSPVLEHIRVPELQEFALRYSS 254


>ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|222855440|gb|EEE92987.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/84 (61%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   ASHAKSLHSLDLSWCRNLTNNALGLIVDSCLSLRLLKLFGCTQVTDAFLNGHSNLQIQII 182
           A  +++L SLDLSWCR LT+ ALG+IVDSCLSL+LLKLFGCTQ+T+AFLNGHSN  ++II
Sbjct: 99  AKCSRNLVSLDLSWCRRLTDEALGMIVDSCLSLKLLKLFGCTQITEAFLNGHSNPMVRII 158

Query: 183 GSKMSPILQHVRVPDPHQGALNYS 254
           G K  P+L+H+   +P +  L YS
Sbjct: 159 GCKTGPVLEHLDALEPQENPLRYS 182


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/76 (63%), Positives = 64/76 (84%)
 Frame = +3

Query: 3   ASHAKSLHSLDLSWCRNLTNNALGLIVDSCLSLRLLKLFGCTQVTDAFLNGHSNLQIQII 182
           A  ++ L  LDLSWCRNLT+  LG IVDSCLSLR+LKLFGCTQ+T+ F++GHSN Q++II
Sbjct: 752 ARRSRELIRLDLSWCRNLTDGDLGFIVDSCLSLRVLKLFGCTQITNMFVDGHSNPQVEII 811

Query: 183 GSKMSPILQHVRVPDP 230
           G K++PIL+H+++ DP
Sbjct: 812 GLKLTPILKHLKLTDP 827


Top