BLASTX nr result

ID: Glycyrrhiza23_contig00034755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034755
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    69   3e-10
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              69   4e-10
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              69   5e-10
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              69   5e-10
gb|ABD32321.2| Ribonuclease H [Medicago truncatula]                    66   3e-09

>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
 Frame = -1

Query: 314 EHMQTRINDCPKRQVNIAWVPPCEGSYKVSIDGSHSKAG-ISSCGGLVCNSYGSMIHGFY 138
           +H+Q   N   K  V I W  P +G  K++ DG+    G ++ CGGL+  S G+ I GF 
Sbjct: 186 DHLQK--NPHHKEIVYIDWKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFS 243

Query: 137 CKVGAGNALWAELWGLRMGIKLAQHLNLRNVVFEMNSKSILEMI 6
            K+GA +AL AE+WGL +G+ +A    + +++ E +SK +++M+
Sbjct: 244 RKIGACDALHAEMWGLYLGLDMAWREGISHLIVESDSKVLIDMV 287


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275  QVNIAWVPPCEGSYKVSIDGS-HSKAGISSCGGLVCNSYGSMIHGFYCKVGAGNALWAEL 99
            Q  + W PP  G  K++ DG+  S + ++S GGL+ N  G  + G+ C +G  N+  AEL
Sbjct: 1195 QTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAEL 1254

Query: 98   WGLRMGIKLAQHLNLRNVVFEMNSKSILEMI 6
            WGLR G+ LA++     ++ E +S+++++++
Sbjct: 1255 WGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275  QVNIAWVPPCEGSYKVSIDGS-HSKAGISSCGGLVCNSYGSMIHGFYCKVGAGNALWAEL 99
            Q  + W PP  G  K++ DG+  S + ++S GGL+ N  G  + G+ C +G  N+  AEL
Sbjct: 1727 QTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAEL 1786

Query: 98   WGLRMGIKLAQHLNLRNVVFEMNSKSILEMI 6
            WGLR G+ LA++     ++ E +S+++++++
Sbjct: 1787 WGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1817


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275  QVNIAWVPPCEGSYKVSIDGS-HSKAGISSCGGLVCNSYGSMIHGFYCKVGAGNALWAEL 99
            Q  + W PP  G  K++ DG+  S + ++S GGL+ N  G  + G+ C +G  N+  AEL
Sbjct: 1195 QTWVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAEL 1254

Query: 98   WGLRMGIKLAQHLNLRNVVFEMNSKSILEMI 6
            WGLR G+ LA++     ++ E +S+++++++
Sbjct: 1255 WGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285


>gb|ABD32321.2| Ribonuclease H [Medicago truncatula]
          Length = 220

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 KRQVNIAWVPPCEGSYKVSIDGSHSKAG-ISSCGGLVCNSYGSMIHGFYCKVGAGNALWA 105
           K  + I W  P EG  K++ DG+    G I+ CGGL  +  G  I G+  K+GA +AL A
Sbjct: 45  KEIIYIGWKRPREGLIKLNSDGACKDMGVIAGCGGLFRDLDGRWIKGYTKKIGACDALHA 104

Query: 104 ELWGLRMGIKLAQHLNLRNVVFEMNSKSILEMIA 3
           E+WGL +G+ +A   +  +++ E +SK +++MI+
Sbjct: 105 EMWGLYLGLDMAWREHYSHLIVESDSKILIDMIS 138


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