BLASTX nr result

ID: Glycyrrhiza23_contig00034753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034753
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   170   1e-40
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40

>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/115 (77%), Positives = 102/115 (88%)
 Frame = +3

Query: 3   EVEVRVGTALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCE 182
           +V VRVGTALVDMYCKCGSLEDARKVFD + G+DVVAWNSMIMGY +HGFS+EAL+LF E
Sbjct: 288 KVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHE 347

Query: 183 MRGVGVKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
           M  +GVKPS +TF+A LTAC H+GLVSKGWEVF+ MKD YGMEPK+EH+GC VNL
Sbjct: 348 MCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNL 402



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
 Frame = +3

Query: 24  TALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEM------ 185
           TA++  Y K G L +AR +F+ +  +DVV WN MI GYA HG   EAL  F +M      
Sbjct: 187 TAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGG 246

Query: 186 RGVG-VKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
            G G V+P+ +T +A L++CG  G +  G  V +           +E+ G KVN+
Sbjct: 247 NGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSY----------VENNGIKVNV 291


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   EVEVRVGTALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCE 182
           +  V VGTALVDMY KCGSLEDAR VFD+I  +DVVAWNSMI+GYA+HGFS+EAL+LF  
Sbjct: 222 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 281

Query: 183 MRGVGVKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
           M  +G+ P+++TFI  L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNL
Sbjct: 282 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 336



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +3

Query: 24  TALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVK 203
           TA++  Y K G L+ AR +FD +  RD V WN MI GY  +G   EAL LF  M     K
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187

Query: 204 PSHVTFIAPLTACGHSGLVSKG 269
           P+ VT ++ L+ACG  G +  G
Sbjct: 188 PNEVTVLSVLSACGQLGALESG 209


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   EVEVRVGTALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCE 182
           +  V VGTALVDMY KCGSLEDAR VFD+I  +DVVAWNSMI+GYA+HGFS+EAL+LF  
Sbjct: 288 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 347

Query: 183 MRGVGVKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
           M  +G+ P+++TFI  L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNL
Sbjct: 348 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +3

Query: 24  TALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVK 203
           TA++  Y K G L+ AR +FD +  RD V WN MI GY  +G   EAL LF  M     K
Sbjct: 194 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 253

Query: 204 PSHVTFIAPLTACGHSGLVSKG 269
           P+ VT ++ L+ACG  G +  G
Sbjct: 254 PNEVTVLSVLSACGQLGALESG 275


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/115 (67%), Positives = 97/115 (84%)
 Frame = +3

Query: 3   EVEVRVGTALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCE 182
           +  V VGTALVDMY KCGSLEDAR VFD+I  +DVVAWNSMI+GYA+ GFS+EAL+LF  
Sbjct: 235 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKS 294

Query: 183 MRGVGVKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
           M  +G+ P+++TFI  L+ACGHSG V++GW++FN MKDEYG+EPKIEH+GC VNL
Sbjct: 295 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 349



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +3

Query: 24  TALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVK 203
           TA++  Y K G L+ AR +FD +  RD V WN MI GY  +G   EAL LF  M     K
Sbjct: 141 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 200

Query: 204 PSHVTFIAPLTACGHSGLVSKG 269
           P+ VT ++ L+ACG  G +  G
Sbjct: 201 PNEVTVLSVLSACGQLGALESG 222


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  169 bits (427), Expect = 3e-40
 Identities = 75/114 (65%), Positives = 95/114 (83%)
 Frame = +3

Query: 6   VEVRVGTALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEM 185
           + VRVGT+L+DMY KCGSLEDAR VF+RI  +DVVAWNSM++GYA+HGFS++AL LF EM
Sbjct: 105 INVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEM 164

Query: 186 RGVGVKPSHVTFIAPLTACGHSGLVSKGWEVFNLMKDEYGMEPKIEHFGCKVNL 347
             +G +P+ +TFI  L AC H+GLVS+GW+ F  MKDEYG+EPK+EH+GC VNL
Sbjct: 165 CMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNL 218



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = +3

Query: 24  TALVDMYCKCGSLEDARKVFDRIVGRDVVAWNSMIMGYAVHGFSEEALELFCEMRGVGVK 203
           TA++  Y K G +++AR +FD +  RD + WN MI GYA HG   E L LF +M    V+
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69

Query: 204 PSHVTFIAPLTACGHSGLVSKG 269
           P+ VT +A L+ACG +G +  G
Sbjct: 70  PNEVTVLAVLSACGQTGALETG 91


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