BLASTX nr result

ID: Glycyrrhiza23_contig00034711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034711
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    95   7e-18
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    69   5e-10
dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]                    67   2e-09
ref|XP_002532484.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 189 GPPLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPEKQKI*ES 323
           GPPLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPP+KQKI ES
Sbjct: 273 GPPLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES 317


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/73 (54%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 331 LSLDSQIFCFSGGGEQCSXXXXXXXXXXXXXXLARKNRSLASRTSGGPY-LETY*KPCLS 155
           L LDS+IFCFSGGGEQCS               ARKNRSLASRTSGGP    T      +
Sbjct: 50  LHLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGGPIRRHTENHAFRT 109

Query: 154 NRTARLPNPKKRG 116
            R ARLP  KK G
Sbjct: 110 ERNARLPKKKKNG 122


>dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]
          Length = 74

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/52 (73%), Positives = 41/52 (78%)
 Frame = +2

Query: 188 GPPTSPAS**AVLSGEKRAGPYGRASPATQAALFATTREAKDLRVQA*YTCI 343
           GP TSPAS   +LSG K+AGP GRASPATQAA FATTREAKD RV+A  T I
Sbjct: 24  GPTTSPAS---LLSGRKQAGPDGRASPATQAAWFATTREAKDSRVKAEKTSI 72


>ref|XP_002532484.1| conserved hypothetical protein [Ricinus communis]
           gi|223527809|gb|EEF29908.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +3

Query: 234 RSGPGPTGGHLPQRKLHCSPPPEKQKI 314
           RS PGPTGGHLPQ KLHCSPPPEKQKI
Sbjct: 62  RSRPGPTGGHLPQCKLHCSPPPEKQKI 88


Top