BLASTX nr result

ID: Glycyrrhiza23_contig00034667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034667
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   149   2e-34
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   139   2e-31
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              139   2e-31
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          132   4e-29
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   131   7e-29

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/75 (92%), Positives = 70/75 (93%)
 Frame = -2

Query: 226 NLVPPEVFDALHDAVKDNGALIHLCCDPSRNGPNDYHIISSSKHEKFEDLKSKGCKLLGP 47
           NLVPPEVFD LHDAVKDNGA IHLCCDPSRNGPNDYHIISSSKHEKF+DLKSKGCKLLGP
Sbjct: 17  NLVPPEVFDKLHDAVKDNGAQIHLCCDPSRNGPNDYHIISSSKHEKFDDLKSKGCKLLGP 76

Query: 46  RCVLSCAKEQRPLPK 2
            CVLSCAK  RPLPK
Sbjct: 77  ICVLSCAKGGRPLPK 91


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = -2

Query: 226 NLVPPEVFDALHDAVKDNGALIHLCCDPSRNGPNDYHIISSSKHEKFEDLKSKGCKLLGP 47
           NLVPPE+FD+LHDA+K NGA + LCCDPSRNGPNDYHIISSS HEKFEDL++KGC LLGP
Sbjct: 17  NLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFEDLRAKGCNLLGP 76

Query: 46  RCVLSCAKEQRPLPK 2
           +CVLSCAKE RPLPK
Sbjct: 77  QCVLSCAKEHRPLPK 91


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = -2

Query: 226 NLVPPEVFDALHDAVKDNGALIHLCCDPSRNGPNDYHIISSSKHEKFEDLKSKGCKLLGP 47
           NLVPPE+FD+LHDA+K NGA + LCCDPSRNGPNDYHIISSS HEKFEDL++KGC LLGP
Sbjct: 17  NLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFEDLRAKGCNLLGP 76

Query: 46  RCVLSCAKEQRPLPK 2
           +CVLSCAKE RPLPK
Sbjct: 77  QCVLSCAKEHRPLPK 91


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/75 (80%), Positives = 65/75 (86%)
 Frame = -2

Query: 226 NLVPPEVFDALHDAVKDNGALIHLCCDPSRNGPNDYHIISSSKHEKFEDLKSKGCKLLGP 47
           NLVPPEVFDAL DA+K NGA + LCCDPSRNGPNDYHIISS  HEKFEDL++KGC LLGP
Sbjct: 17  NLVPPEVFDALLDALKHNGAEVFLCCDPSRNGPNDYHIISSPDHEKFEDLRAKGCTLLGP 76

Query: 46  RCVLSCAKEQRPLPK 2
           +CV SCAKE R LPK
Sbjct: 77  QCVFSCAKEHRALPK 91


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/75 (80%), Positives = 66/75 (88%)
 Frame = -2

Query: 226 NLVPPEVFDALHDAVKDNGALIHLCCDPSRNGPNDYHIISSSKHEKFEDLKSKGCKLLGP 47
           NLVPPEVFDAL DA++ NGA + LCCDPSRNGPNDYHIISS  HEKFEDL++KGC LLGP
Sbjct: 17  NLVPPEVFDALLDALRLNGAQVLLCCDPSRNGPNDYHIISSPDHEKFEDLRAKGCNLLGP 76

Query: 46  RCVLSCAKEQRPLPK 2
           +CVLSCAKE R LPK
Sbjct: 77  QCVLSCAKEHRTLPK 91


Top