BLASTX nr result

ID: Glycyrrhiza23_contig00034660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034660
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...   122   4e-26
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   104   9e-21
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...    99   5e-19
ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002885812.1| hypothetical protein ARALYDRAFT_319345 [Arab...    97   1e-18

>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/151 (49%), Positives = 95/151 (62%), Gaps = 11/151 (7%)
 Frame = +1

Query: 4   AQRSASHFARFIPDAAQDDVGPSS--SQLEHEFDVSTPFSXXXXXXXXXXXXXXXSITAE 177
           A+R+A+H+ARF  D+   D G S   +   +  D  TPFS                +   
Sbjct: 194 AKRNATHYARF-DDSEVGDEGTSLYLNPQGNIDDSETPFSIAMKAIKDRAMKK--KVCDA 250

Query: 178 WVSKRIP---------VPSLVELSLKVLANHADAIVSLDGVPDELRHRLCRLLCDSRKMN 330
           WV KR P         VPSL EL L++LAN+ADA+VSL+GVPDELR +L +LLCDSRKMN
Sbjct: 251 WVPKRNPQGGEKRFFLVPSLQELCLEILANNADAMVSLEGVPDELRRKLSKLLCDSRKMN 310

Query: 331 GRVLELLVSGSPTDIRLNDCSGITEEQFIRA 423
            R LELL+SGSPT+IR+ DCS +TEEQF ++
Sbjct: 311 SRFLELLLSGSPTEIRIKDCSWLTEEQFAKS 341


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score =  104 bits (259), Expect = 9e-21
 Identities = 66/155 (42%), Positives = 84/155 (54%), Gaps = 18/155 (11%)
 Frame = +1

Query: 4   AQRSASHFARFIPDAAQDDVGPSSSQLEHEF-DVSTPFSXXXXXXXXXXXXXXXSITA-- 174
           A+ +AS FA F P+    D  P       E  D   PFS               +  +  
Sbjct: 50  ARENASRFAFFAPEGEDHDRSPPVEPERDEIEDWPGPFSTAMKIIRDRGSKLQNAEASSQ 109

Query: 175 -------EWV--SKR------IPVPSLVELSLKVLANHADAIVSLDGVPDELRHRLCRLL 309
                  +WV  +KR      + VPSL E+ LK+L  + DAI SL+ VPD LRHRL +LL
Sbjct: 110 ASLCESIKWVPNAKRGNAGVNVSVPSLQEMCLKILVKNVDAIASLESVPDALRHRLSQLL 169

Query: 310 CDSRKMNGRVLELLVSGSPTDIRLNDCSGITEEQF 414
           CDSR++NG  LELLV G+PT+IRL DCS +TEEQF
Sbjct: 170 CDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQF 204


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
 Frame = +1

Query: 163 SITAEWV-----SKRIPVPSLVELSLKVLANHADAIVSLDGVPDELRHRLCRLLCDSRKM 327
           S+   WV       R  VPSL EL ++++  + DA+ SLD VPD LRHRLC+LLCD RKM
Sbjct: 327 SVPITWVPTRNRQSRTCVPSLQELCMRIIVKNVDAVTSLDHVPDALRHRLCQLLCDCRKM 386

Query: 328 NGRVLELLVSGSPTDIRLNDCSGITEEQFIR 420
           N   L+LLV GSPT+IR+ DCS ++EE+ ++
Sbjct: 387 NSSFLDLLVRGSPTEIRVKDCSWMSEEELVK 417


>ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|222833314|gb|EEE71791.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +1

Query: 199 VPSLVELSLKVLANHADAIVSLDGVPDELRHRLCRLLCDSRKMNGRVLELLVSGSPTDIR 378
           VPSL EL +K+L  +ADAI SL+ VPD LRHRLC+LLCDSR+MN   L LLV GSP +IR
Sbjct: 464 VPSLQELCMKILVKNADAIASLEHVPDALRHRLCQLLCDSRRMNAHFLALLVRGSPMEIR 523

Query: 379 LNDCSGITEEQFIR 420
           + DCS + EE+F +
Sbjct: 524 IRDCSWLAEEEFTK 537


>ref|XP_002885812.1| hypothetical protein ARALYDRAFT_319345 [Arabidopsis lyrata subsp.
           lyrata] gi|297331652|gb|EFH62071.1| hypothetical protein
           ARALYDRAFT_319345 [Arabidopsis lyrata subsp. lyrata]
          Length = 773

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 66/155 (42%), Positives = 84/155 (54%), Gaps = 18/155 (11%)
 Frame = +1

Query: 4   AQRSASHFARFIPDAAQD-DVGPSSSQLEHEFDVSTPFSXXXXXXXXXXXXXXX------ 162
           A+R+AS FARF     ++ D+     +L+ E D   PFS                     
Sbjct: 287 AKRNASRFARFDAQMEEEEDLSDKEGELQVE-DWPGPFSTAIKIIKDREENTTPYVGIGV 345

Query: 163 -----SITAEWVSKRI------PVPSLVELSLKVLANHADAIVSLDGVPDELRHRLCRLL 309
                S    WV KR         PSL ELSL++L  +ADAI SLD VPD LR +LC+LL
Sbjct: 346 SNKERSSPPIWVPKRNCSLTPRKAPSLQELSLRILVKNADAITSLDYVPDTLRVKLCQLL 405

Query: 310 CDSRKMNGRVLELLVSGSPTDIRLNDCSGITEEQF 414
           CDSR+M+   L+LLV GSPT+I + DCS +TEEQF
Sbjct: 406 CDSRRMDVHFLDLLVQGSPTEICVPDCSWLTEEQF 440


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