BLASTX nr result
ID: Glycyrrhiza23_contig00034652
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034652 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog ... 144 7e-33 emb|CBI17834.3| unnamed protein product [Vitis vinifera] 142 3e-32 ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ... 142 3e-32 emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera] 142 3e-32 ref|XP_002531657.1| X-ray repair cross complementing protein 3, ... 138 5e-31 >ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog [Glycine max] Length = 288 Score = 144 bits (363), Expect = 7e-33 Identities = 65/81 (80%), Positives = 72/81 (88%) Frame = +3 Query: 90 TEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASSL 269 T+KC +GCP+LDRCL GG+PC SVTE V ESG GKTQLCLQL LSAQLPPSHGGLSASS+ Sbjct: 13 TQKCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLPPSHGGLSASSI 72 Query: 270 YIHTEFPFPLRRLKQLSRAFR 332 +IHTEFPFP RRL+ LSRAFR Sbjct: 73 FIHTEFPFPFRRLRHLSRAFR 93 >emb|CBI17834.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 142 bits (358), Expect = 3e-32 Identities = 66/82 (80%), Positives = 76/82 (92%) Frame = +3 Query: 87 TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266 TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS Sbjct: 14 TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 73 Query: 267 LYIHTEFPFPLRRLKQLSRAFR 332 LYIH+EFPFP RRL+QLS++FR Sbjct: 74 LYIHSEFPFPSRRLQQLSQSFR 95 >ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera] Length = 300 Score = 142 bits (358), Expect = 3e-32 Identities = 66/82 (80%), Positives = 76/82 (92%) Frame = +3 Query: 87 TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266 TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS Sbjct: 14 TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 73 Query: 267 LYIHTEFPFPLRRLKQLSRAFR 332 LYIH+EFPFP RRL+QLS++FR Sbjct: 74 LYIHSEFPFPSRRLQQLSQSFR 95 >emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera] Length = 2077 Score = 142 bits (358), Expect = 3e-32 Identities = 66/82 (80%), Positives = 76/82 (92%) Frame = +3 Query: 87 TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266 TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS Sbjct: 1791 TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 1850 Query: 267 LYIHTEFPFPLRRLKQLSRAFR 332 LYIH+EFPFP RRL+QLS++FR Sbjct: 1851 LYIHSEFPFPSRRLQQLSQSFR 1872 >ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray repair cross complementing protein 3, xrcc3, putative [Ricinus communis] Length = 301 Score = 138 bits (347), Expect = 5e-31 Identities = 65/84 (77%), Positives = 72/84 (85%) Frame = +3 Query: 81 PTTTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSA 260 P T+KC +GCPILDRCL GGIPC S+TE+VAESGTGKTQLCLQL L AQLP S GGLSA Sbjct: 10 PIPTQKCTLGCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQLPLSLGGLSA 69 Query: 261 SSLYIHTEFPFPLRRLKQLSRAFR 332 SSLY+HTEFPFP RRL QLS +F+ Sbjct: 70 SSLYLHTEFPFPFRRLHQLSHSFQ 93