BLASTX nr result

ID: Glycyrrhiza23_contig00034652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034652
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog ...   144   7e-33
emb|CBI17834.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...   142   3e-32
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]   142   3e-32
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...   138   5e-31

>ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog [Glycine max]
          Length = 288

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = +3

Query: 90  TEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASSL 269
           T+KC +GCP+LDRCL GG+PC SVTE V ESG GKTQLCLQL LSAQLPPSHGGLSASS+
Sbjct: 13  TQKCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLPPSHGGLSASSI 72

Query: 270 YIHTEFPFPLRRLKQLSRAFR 332
           +IHTEFPFP RRL+ LSRAFR
Sbjct: 73  FIHTEFPFPFRRLRHLSRAFR 93


>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = +3

Query: 87  TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266
           TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS
Sbjct: 14  TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 73

Query: 267 LYIHTEFPFPLRRLKQLSRAFR 332
           LYIH+EFPFP RRL+QLS++FR
Sbjct: 74  LYIHSEFPFPSRRLQQLSQSFR 95


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = +3

Query: 87  TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266
           TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS
Sbjct: 14  TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 73

Query: 267 LYIHTEFPFPLRRLKQLSRAFR 332
           LYIH+EFPFP RRL+QLS++FR
Sbjct: 74  LYIHSEFPFPSRRLQQLSQSFR 95


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = +3

Query: 87   TTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSASS 266
            TT+KC +GCPILDRCL GG+PC S+TELVAESG+GKTQLCLQLVLSAQLP S GGL+ASS
Sbjct: 1791 TTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAASS 1850

Query: 267  LYIHTEFPFPLRRLKQLSRAFR 332
            LYIH+EFPFP RRL+QLS++FR
Sbjct: 1851 LYIHSEFPFPSRRLQQLSQSFR 1872


>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = +3

Query: 81  PTTTEKCRVGCPILDRCLGGGIPCKSVTELVAESGTGKTQLCLQLVLSAQLPPSHGGLSA 260
           P  T+KC +GCPILDRCL GGIPC S+TE+VAESGTGKTQLCLQL L AQLP S GGLSA
Sbjct: 10  PIPTQKCTLGCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQLPLSLGGLSA 69

Query: 261 SSLYIHTEFPFPLRRLKQLSRAFR 332
           SSLY+HTEFPFP RRL QLS +F+
Sbjct: 70  SSLYLHTEFPFPFRRLHQLSHSFQ 93


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