BLASTX nr result

ID: Glycyrrhiza23_contig00034632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034632
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine...   229   2e-58
ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...   225   3e-57
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   204   5e-51
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...   204   5e-51
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              203   1e-50

>ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score =  229 bits (583), Expect = 2e-58
 Identities = 112/123 (91%), Positives = 116/123 (94%)
 Frame = -2

Query: 371  GNAIELAFSKKKAEDRKTWIRNFEPGTYRDHSASLINYKDFVNKELILFSRADLQRSIPS 192
            G AIE+AFSKKKAEDRK WIRNFEPGT RDH A  INY+DFVNKELIL+SRADLQRSIPS
Sbjct: 643  GGAIEMAFSKKKAEDRKIWIRNFEPGTCRDHMAKYINYRDFVNKELILYSRADLQRSIPS 702

Query: 191  MVDGLKPGQRKILFCSFKKKLYKEIKVGQFIGYVSEHSAYHHGEQSLSSTIINMAQDFVG 12
            MVDGLKPGQRKILFCSFKKKL KEIKVGQFIGYVSEHSAYHHGEQSL+STIINMAQDFVG
Sbjct: 703  MVDGLKPGQRKILFCSFKKKLSKEIKVGQFIGYVSEHSAYHHGEQSLASTIINMAQDFVG 762

Query: 11   SNN 3
            SNN
Sbjct: 763  SNN 765


>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
            DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score =  225 bits (574), Expect = 3e-57
 Identities = 110/123 (89%), Positives = 116/123 (94%)
 Frame = -2

Query: 371  GNAIELAFSKKKAEDRKTWIRNFEPGTYRDHSASLINYKDFVNKELILFSRADLQRSIPS 192
            GNAIELAFSKKKAEDRK W+R+FEPGT RDH A LI+YKDFV+KELILFSRADLQRSIPS
Sbjct: 697  GNAIELAFSKKKAEDRKNWMRSFEPGTCRDHEAKLISYKDFVDKELILFSRADLQRSIPS 756

Query: 191  MVDGLKPGQRKILFCSFKKKLYKEIKVGQFIGYVSEHSAYHHGEQSLSSTIINMAQDFVG 12
            MVDGLKPGQRKILFCSFKK L KE+KVGQFIGYVSEHSAYHHGEQSL+STII MAQDFVG
Sbjct: 757  MVDGLKPGQRKILFCSFKKNLSKEVKVGQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVG 816

Query: 11   SNN 3
            SNN
Sbjct: 817  SNN 819


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/123 (81%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 GNAIELAFSKKKAEDRKTWIRNFEPGTYRDHSASLINYKDFVNKELILFSRADLQRSIPS 192
           G AIELAFSKKK EDRK W+R FEPGT+ D +  LI Y DFVNKELILFS ADLQRSIPS
Sbjct: 605 GEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPS 664

Query: 191 MVDGLKPGQRKILFCSFKKKLYKEIKVGQFIGYVSEHSAYHHGEQSLSSTIINMAQDFVG 12
           MVDGLKPGQRKILFCSFK+   KE KV QF GYVSEHSAYHHGEQSL+STII MAQDFVG
Sbjct: 665 MVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVG 724

Query: 11  SNN 3
           SNN
Sbjct: 725 SNN 727


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/123 (81%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 GNAIELAFSKKKAEDRKTWIRNFEPGTYRDHSASLINYKDFVNKELILFSRADLQRSIPS 192
           G AIELAFSKKK EDRK W+R FEPGT+ D +  LI Y DFVNKELILFS ADLQRSIPS
Sbjct: 605 GEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPS 664

Query: 191 MVDGLKPGQRKILFCSFKKKLYKEIKVGQFIGYVSEHSAYHHGEQSLSSTIINMAQDFVG 12
           MVDGLKPGQRKILFCSFK+   KE KV QF GYVSEHSAYHHGEQSL+STII MAQDFVG
Sbjct: 665 MVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVG 724

Query: 11  SNN 3
           SNN
Sbjct: 725 SNN 727


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/123 (79%), Positives = 105/123 (85%)
 Frame = -2

Query: 371  GNAIELAFSKKKAEDRKTWIRNFEPGTYRDHSASLINYKDFVNKELILFSRADLQRSIPS 192
            G+AIELAFSKKK E+RK W+R F+PGTY D    LI Y DFVNKELILFS ADLQRSIPS
Sbjct: 641  GDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPS 700

Query: 191  MVDGLKPGQRKILFCSFKKKLYKEIKVGQFIGYVSEHSAYHHGEQSLSSTIINMAQDFVG 12
            MVDGLKPGQRKILFCSFK+   KE K+ QF GYVSEHSAYHHGEQSL+STII MAQDFVG
Sbjct: 701  MVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVG 760

Query: 11   SNN 3
            SNN
Sbjct: 761  SNN 763


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