BLASTX nr result

ID: Glycyrrhiza23_contig00034624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034624
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   260   9e-68
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   242   3e-62
ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   240   1e-61
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   240   1e-61
ref|XP_002515746.1| DNA polymerase delta catalytic subunit, puta...   233   2e-59

>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
           gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
           max]
          Length = 1088

 Score =  260 bits (664), Expect = 9e-68
 Identities = 125/140 (89%), Positives = 132/140 (94%)
 Frame = +1

Query: 82  TLISEDEESLILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHR 261
           TL+SEDEESLILRDIEQRQ+LA+RLSKWTRPPLS+ Y++QSRS+LFQQLEIDYVI ESH 
Sbjct: 17  TLVSEDEESLILRDIEQRQALANRLSKWTRPPLSAGYVAQSRSVLFQQLEIDYVIAESHG 76

Query: 262 ELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARM 441
           ELLPNSSGP AIIRIFGVTKEGHSVCC VHGFEPYFYI CPPGMGPDDISHFHQ LE RM
Sbjct: 77  ELLPNSSGPVAIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRM 136

Query: 442 REANRNSNVGKFVRRIEMVQ 501
           REANRNSNVGKFVRRIEMVQ
Sbjct: 137 REANRNSNVGKFVRRIEMVQ 156


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  242 bits (617), Expect = 3e-62
 Identities = 124/168 (73%), Positives = 133/168 (79%), Gaps = 2/168 (1%)
 Frame = +1

Query: 4   PSQPPPTRQALSQXXXXXXXXXXXXX--TLISEDEESLILRDIEQRQSLASRLSKWTRPP 177
           PSQP P  QA S                TLI EDE   ILRDIE R++LASRLSKW RPP
Sbjct: 18  PSQPQPKHQASSSPLAEEDLDEDVFLEETLILEDEH--ILRDIEDRRALASRLSKWARPP 75

Query: 178 LSSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGF 357
           LSS YLS S+SI+FQQLEIDYVIGESH+EL+PNSSG AAIIRIFGVT+EGHSVCC VHGF
Sbjct: 76  LSSAYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGSAAIIRIFGVTREGHSVCCNVHGF 135

Query: 358 EPYFYINCPPGMGPDDISHFHQILEARMREANRNSNVGKFVRRIEMVQ 501
           EPYFYI+CPPGMGPDDIS FHQ+LE RMRE NRNS V KFVRRIEMVQ
Sbjct: 136 EPYFYISCPPGMGPDDISRFHQVLEGRMREVNRNSRVPKFVRRIEMVQ 183


>ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
           subunit-like [Cucumis sativus]
          Length = 573

 Score =  240 bits (612), Expect = 1e-61
 Identities = 117/167 (70%), Positives = 135/167 (80%)
 Frame = +1

Query: 1   PPSQPPPTRQALSQXXXXXXXXXXXXXTLISEDEESLILRDIEQRQSLASRLSKWTRPPL 180
           P   PPP  QALSQ             +L+  DE++LILRDIE+RQ+LASR+SKW RPPL
Sbjct: 16  PSPAPPPKHQALSQEEDFVDEDVFLDESLL--DEDALILRDIEERQALASRISKWARPPL 73

Query: 181 SSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFE 360
           S +YLSQS+SI+FQQLEIDYVIGESH+ELLPN SGPAAI+RIFGVT+EGHSVCC VHGFE
Sbjct: 74  SQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGVTREGHSVCCHVHGFE 133

Query: 361 PYFYINCPPGMGPDDISHFHQILEARMREANRNSNVGKFVRRIEMVQ 501
           PYFYI+CP GMGPDDIS FH+ LEARM+E NRN+    FVRRIE+VQ
Sbjct: 134 PYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAPNFVRRIELVQ 180


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  240 bits (612), Expect = 1e-61
 Identities = 117/167 (70%), Positives = 135/167 (80%)
 Frame = +1

Query: 1   PPSQPPPTRQALSQXXXXXXXXXXXXXTLISEDEESLILRDIEQRQSLASRLSKWTRPPL 180
           P   PPP  QALSQ             +L+  DE++LILRDIE+RQ+LASR+SKW RPPL
Sbjct: 16  PSPAPPPKHQALSQEEDFVDEDVFLDESLL--DEDALILRDIEERQALASRISKWARPPL 73

Query: 181 SSEYLSQSRSILFQQLEIDYVIGESHRELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFE 360
           S +YLSQS+SI+FQQLEIDYVIGESH+ELLPN SGPAAI+RIFGVT+EGHSVCC VHGFE
Sbjct: 74  SQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGVTREGHSVCCHVHGFE 133

Query: 361 PYFYINCPPGMGPDDISHFHQILEARMREANRNSNVGKFVRRIEMVQ 501
           PYFYI+CP GMGPDDIS FH+ LEARM+E NRN+    FVRRIE+VQ
Sbjct: 134 PYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAPNFVRRIELVQ 180


>ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
           gi|223545183|gb|EEF46693.1| DNA polymerase delta
           catalytic subunit, putative [Ricinus communis]
          Length = 1049

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/140 (79%), Positives = 127/140 (90%)
 Frame = +1

Query: 82  TLISEDEESLILRDIEQRQSLASRLSKWTRPPLSSEYLSQSRSILFQQLEIDYVIGESHR 261
           TLI+EDEE+LILRD+E+ ++LASRLS+W RPPLS  YLSQS+SI+FQQLEIDYVIGES+R
Sbjct: 47  TLIAEDEENLILRDLEKHEALASRLSRWARPPLSHAYLSQSQSIIFQQLEIDYVIGESNR 106

Query: 262 ELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFEPYFYINCPPGMGPDDISHFHQILEARM 441
           ELLP+ SGPAAIIRIFGVT+EGHSVCC VHGFEPYFYI+CP GMGPDDIS F QILE RM
Sbjct: 107 ELLPDRSGPAAIIRIFGVTREGHSVCCNVHGFEPYFYISCPSGMGPDDISSFQQILEGRM 166

Query: 442 REANRNSNVGKFVRRIEMVQ 501
           RE NR+S V KF+RRIE+VQ
Sbjct: 167 REVNRSSKVPKFIRRIEVVQ 186


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