BLASTX nr result
ID: Glycyrrhiza23_contig00034614
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034614 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li... 144 1e-32 ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li... 130 8e-29 ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235... 122 3e-26 ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|2... 117 7e-25 ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li... 113 1e-23 >ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max] Length = 576 Score = 144 bits (362), Expect = 1e-32 Identities = 73/101 (72%), Positives = 83/101 (82%), Gaps = 2/101 (1%) Frame = -1 Query: 297 QVAAAARMDSSSERKSEALCSVEEED-STDNNKCSNFYDVYGPQGKADVVFKL-DDNSTL 124 QV AA RM SSE ++EAL EEE+ ST N KC FYDVYGP+GKAD+VF +DNSTL Sbjct: 3 QVVAAERM-GSSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNSTL 61 Query: 123 NLTDIQGLVTWVLGEGLMPSWVFIKNKPLIPKVVILYIPGL 1 NL+D+QGLVTWVL EG MPSWVFIKNKPLIPKVV+LY+PGL Sbjct: 62 NLSDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGL 102 >ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max] Length = 567 Score = 130 bits (328), Expect = 8e-29 Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 1/78 (1%) Frame = -1 Query: 231 EEEDSTDNNKCSNFYDVYGPQGKADVVFKL-DDNSTLNLTDIQGLVTWVLGEGLMPSWVF 55 EEEDST K FYD+YGP+GKADVVF +DNSTLNL+D+QGLVTWVLGEG MPSWVF Sbjct: 16 EEEDSTSTKKRGKFYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVF 75 Query: 54 IKNKPLIPKVVILYIPGL 1 IKNKPLIPKVV+LY+PGL Sbjct: 76 IKNKPLIPKVVMLYVPGL 93 >ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1| rnase h, putative [Ricinus communis] Length = 572 Score = 122 bits (306), Expect = 3e-26 Identities = 58/92 (63%), Positives = 75/92 (81%), Gaps = 3/92 (3%) Frame = -1 Query: 267 SSERKSEALCSVEEEDSTDN--NKCSNFYDVYGPQGKADVVFKLDD-NSTLNLTDIQGLV 97 S + + +A+ S +E+DSTDN N +N++D+YGPQ KA++VFK+ + N TLNL D+QGLV Sbjct: 7 SPKHEIQAVSSSKEDDSTDNCNNITNNYFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLV 66 Query: 96 TWVLGEGLMPSWVFIKNKPLIPKVVILYIPGL 1 TWVL EG MPSWVFIKNKPLIPKV +L+IPGL Sbjct: 67 TWVLAEGFMPSWVFIKNKPLIPKVAMLFIPGL 98 >ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|222856924|gb|EEE94471.1| predicted protein [Populus trichocarpa] Length = 545 Score = 117 bits (294), Expect = 7e-25 Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 5/97 (5%) Frame = -1 Query: 276 MDSSSERKSEALCSVEEEDSTD---NNKCSNFYDVYGPQGKADVVFKL--DDNSTLNLTD 112 M S+ERKSE V+EE ++D ++K + FYD+YGP +A+VV+K + +STLNL D Sbjct: 1 MGDSAERKSE----VKEEKTSDCSSSSKGNKFYDIYGPDARAEVVYKTPPETSSTLNLQD 56 Query: 111 IQGLVTWVLGEGLMPSWVFIKNKPLIPKVVILYIPGL 1 +QGLVTWVL EG MPSWVFIKNKPLIPKVV+LY+PGL Sbjct: 57 VQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGL 93 >ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera] Length = 572 Score = 113 bits (283), Expect = 1e-23 Identities = 52/76 (68%), Positives = 63/76 (82%), Gaps = 1/76 (1%) Frame = -1 Query: 225 EDSTDNNKCSNFYDVYGPQGKADVVFKLDD-NSTLNLTDIQGLVTWVLGEGLMPSWVFIK 49 E +T+ S F+D+YGP+ KA+VVFK D +STLNL D+QGLVTWVL EG MPSW+FIK Sbjct: 16 ESATNATASSTFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIFIK 75 Query: 48 NKPLIPKVVILYIPGL 1 NKPLIPKVV+LY+PGL Sbjct: 76 NKPLIPKVVMLYVPGL 91