BLASTX nr result

ID: Glycyrrhiza23_contig00034603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034603
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08664.1| reverse transcriptase - beet retrotransposon, put...    72   5e-11
ref|XP_003638036.1| Cysteine-rich receptor-like protein kinase [...    64   1e-08
ref|XP_003637977.1| Cysteine-rich receptor-like protein kinase [...    64   1e-08
gb|ABD32574.2| Endonuclease/exonuclease/phosphatase [Medicago tr...    63   2e-08
gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...    60   2e-07

>gb|ABN08664.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 324

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = -2

Query: 241 DHFGNLETKIKEAKEEVYRLDLKGEVDGLNEVEVGDRRLCIANINRFSSMNCRILWQKSR 62
           +H  N+ +KI+ AK  +  LD  GE+  L++ EV +  +  A+I  FS +   + WQKSR
Sbjct: 99  NHTLNINSKIQGAKGRLAALDALGEIYSLSDEEVTEIHMLSADIMAFSKLQAGMQWQKSR 158

Query: 61  MKWLKEGDANSKFFH 17
           + WLKEGDANSKFFH
Sbjct: 159 INWLKEGDANSKFFH 173


>ref|XP_003638036.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
           gi|355503971|gb|AES85174.1| Cysteine-rich receptor-like
           protein kinase [Medicago truncatula]
          Length = 1694

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -2

Query: 238 HFGNLETKIKEAKEEVYRLDLKGEVDGLNEVEVGDRRLCIANINRFSSMNCRILWQKSRM 59
           H  NL  KI   K     LD KGE   L+E E+ +      +I+  S +N  I WQ+SR+
Sbjct: 163 HTSNLSAKIVSLKNRQAALDSKGEEVELSEEEIAEIHGISTDIHSLSRLNTSICWQQSRL 222

Query: 58  KWLKEGDANSKFFH 17
            W+++GDANSK FH
Sbjct: 223 NWIRDGDANSKIFH 236


>ref|XP_003637977.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
           gi|355503912|gb|AES85115.1| Cysteine-rich receptor-like
           protein kinase [Medicago truncatula]
          Length = 1766

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -2

Query: 238 HFGNLETKIKEAKEEVYRLDLKGEVDGLNEVEVGDRRLCIANINRFSSMNCRILWQKSRM 59
           H  NL  KI   K     LD KGE   L+E E+ +      +I+  S +N  I WQ+SR+
Sbjct: 163 HTSNLSAKIVSLKNRQAALDSKGEEVELSEEEIAEIHGISTDIHSLSRLNTSICWQQSRL 222

Query: 58  KWLKEGDANSKFFH 17
            W+++GDANSK FH
Sbjct: 223 NWIRDGDANSKIFH 236


>gb|ABD32574.2| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 521

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/76 (40%), Positives = 45/76 (59%)
 Frame = -2

Query: 244 KDHFGNLETKIKEAKEEVYRLDLKGEVDGLNEVEVGDRRLCIANINRFSSMNCRILWQKS 65
           + H  N+E+KI E K  +  LD KG+   L E E  + R     ++  S ++  + WQK+
Sbjct: 271 QQHSKNIESKIAEVKNRMSCLDSKGKEFNLLEEETQEIRELSVKLHSLSRVHTSMNWQKA 330

Query: 64  RMKWLKEGDANSKFFH 17
            M W++EGDANSKFFH
Sbjct: 331 MMNWVREGDANSKFFH 346


>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 977

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = -2

Query: 235 FGNLETKIKEAKEEVYRLDLKGEVDGLNEVEVGDRRLCIANINRFSSMNCRILWQKSRMK 56
           +  LE ++   KE++  LD+KGE+  L   EV  R+     + +        L Q++R K
Sbjct: 250 YEGLEVRLDRLKEDIEELDVKGELGLLTLEEVESRKWKFDELWKLLKSREASLVQRARSK 309

Query: 55  WLKEGDANSKFFHRCVQ 5
           WLKEGDANSK+FHR V+
Sbjct: 310 WLKEGDANSKYFHRSVK 326