BLASTX nr result

ID: Glycyrrhiza23_contig00034601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034601
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551401.1| PREDICTED: uncharacterized protein LOC100812...   248   3e-64
ref|XP_003530853.1| PREDICTED: uncharacterized protein LOC100817...   247   6e-64
ref|XP_002303056.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
ref|XP_002262639.1| PREDICTED: uncharacterized protein LOC100259...   216   2e-54
emb|CBI25671.3| unnamed protein product [Vitis vinifera]              216   2e-54

>ref|XP_003551401.1| PREDICTED: uncharacterized protein LOC100812315 [Glycine max]
          Length = 550

 Score =  248 bits (634), Expect = 3e-64
 Identities = 127/158 (80%), Positives = 132/158 (83%)
 Frame = -2

Query: 476 NGVSGTGFXXXXXXXXXXXXXLPSAVAATTSEIRLHNGVAATLVPQRFFITSSILDLTIV 297
           NG SGTGF             LPS VAA T+EIRLHNGVAATL PQRFFITSS+LDLTIV
Sbjct: 44  NGASGTGFLIHRNLLLTTHANLPSVVAADTAEIRLHNGVAATLAPQRFFITSSVLDLTIV 103

Query: 296 GLDDADGESNAQGQNPHYLKTCCKTNVDLGSVVYLLGHTEKQELTVGEGKVVIATDNLIK 117
           GLDD DG+SNAQGQ PHYLKT CK N+DLGS VYLLG+TEKQELTVGEGKVVIATDNLIK
Sbjct: 104 GLDDGDGDSNAQGQCPHYLKTSCKANLDLGSAVYLLGYTEKQELTVGEGKVVIATDNLIK 163

Query: 116 LSTHDGFPWFPGSAGFDVHGNLAFMICDPMKLATSPNT 3
           LST DG  W PGSAGFDVHGNLAFMICDPMKLATSPNT
Sbjct: 164 LST-DGIQWSPGSAGFDVHGNLAFMICDPMKLATSPNT 200


>ref|XP_003530853.1| PREDICTED: uncharacterized protein LOC100817940 [Glycine max]
          Length = 554

 Score =  247 bits (631), Expect = 6e-64
 Identities = 127/158 (80%), Positives = 133/158 (84%)
 Frame = -2

Query: 476 NGVSGTGFXXXXXXXXXXXXXLPSAVAATTSEIRLHNGVAATLVPQRFFITSSILDLTIV 297
           NG  GTGF             LPS VAA T+EIRLHNGVAATLVPQRFFI+SS+LDLTIV
Sbjct: 48  NGAFGTGFLIHRNLLLTTHANLPSVVAADTAEIRLHNGVAATLVPQRFFISSSVLDLTIV 107

Query: 296 GLDDADGESNAQGQNPHYLKTCCKTNVDLGSVVYLLGHTEKQELTVGEGKVVIATDNLIK 117
           GLDDADG+SNAQGQ PHYLKT CK N+DLGS VYLLG+TEKQELTVGEGKVVIATDNLIK
Sbjct: 108 GLDDADGDSNAQGQCPHYLKTSCKANLDLGSAVYLLGYTEKQELTVGEGKVVIATDNLIK 167

Query: 116 LSTHDGFPWFPGSAGFDVHGNLAFMICDPMKLATSPNT 3
           LST DG  W PGSAGFDVHGNLAFMICDPMKLATSPNT
Sbjct: 168 LST-DGIQWGPGSAGFDVHGNLAFMICDPMKLATSPNT 204


>ref|XP_002303056.1| predicted protein [Populus trichocarpa] gi|222844782|gb|EEE82329.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  220 bits (560), Expect = 1e-55
 Identities = 115/160 (71%), Positives = 123/160 (76%), Gaps = 2/160 (1%)
 Frame = -2

Query: 476 NGVSGTGFXXXXXXXXXXXXXLPSAVAATTSEIRLHNGVAATL--VPQRFFITSSILDLT 303
           NG+SGTGF             +PS  AA   EIRL NGVAATL  +  RFFIT+S+LDLT
Sbjct: 40  NGISGTGFLIHRNLLLTAHVNIPSIAAAEGCEIRLQNGVAATLELLGCRFFITTSVLDLT 99

Query: 302 IVGLDDADGESNAQGQNPHYLKTCCKTNVDLGSVVYLLGHTEKQELTVGEGKVVIATDNL 123
           IVGLD  DGESNAQGQ PHYLKTC K N+DLGS VY LGHT+ +ELTVGEGKVVIATDNL
Sbjct: 100 IVGLDSVDGESNAQGQQPHYLKTCSKPNLDLGSAVYFLGHTDNEELTVGEGKVVIATDNL 159

Query: 122 IKLSTHDGFPWFPGSAGFDVHGNLAFMICDPMKLATSPNT 3
           IKLST DG  W PGSAGFD  GNLAFMICDPMKLATSPNT
Sbjct: 160 IKLST-DGVSWSPGSAGFDAQGNLAFMICDPMKLATSPNT 198


>ref|XP_002262639.1| PREDICTED: uncharacterized protein LOC100259020 [Vitis vinifera]
          Length = 534

 Score =  216 bits (550), Expect = 2e-54
 Identities = 113/155 (72%), Positives = 120/155 (77%)
 Frame = -2

Query: 467 SGTGFXXXXXXXXXXXXXLPSAVAATTSEIRLHNGVAATLVPQRFFITSSILDLTIVGLD 288
           S TGF             LPS  AA  SEIRL +GV ATL P RFFITSS+LDLTIVGLD
Sbjct: 40  SATGFLIHRNLLLTTHVNLPSLAAAEASEIRLQDGVPATLFPHRFFITSSVLDLTIVGLD 99

Query: 287 DADGESNAQGQNPHYLKTCCKTNVDLGSVVYLLGHTEKQELTVGEGKVVIATDNLIKLST 108
             DG+S AQGQ PHYLKTC K N+DLGSVVYLLG+TEK+ELTVGEGKVVIATDNLIK+ST
Sbjct: 100 TVDGDSTAQGQQPHYLKTCSKPNLDLGSVVYLLGYTEKKELTVGEGKVVIATDNLIKMST 159

Query: 107 HDGFPWFPGSAGFDVHGNLAFMICDPMKLATSPNT 3
            DG  W PGSAGFD  GNLAFMICDPMKLATSP T
Sbjct: 160 -DGVTWSPGSAGFDAQGNLAFMICDPMKLATSPIT 193


>emb|CBI25671.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  216 bits (550), Expect = 2e-54
 Identities = 113/155 (72%), Positives = 120/155 (77%)
 Frame = -2

Query: 467 SGTGFXXXXXXXXXXXXXLPSAVAATTSEIRLHNGVAATLVPQRFFITSSILDLTIVGLD 288
           S TGF             LPS  AA  SEIRL +GV ATL P RFFITSS+LDLTIVGLD
Sbjct: 40  SATGFLIHRNLLLTTHVNLPSLAAAEASEIRLQDGVPATLFPHRFFITSSVLDLTIVGLD 99

Query: 287 DADGESNAQGQNPHYLKTCCKTNVDLGSVVYLLGHTEKQELTVGEGKVVIATDNLIKLST 108
             DG+S AQGQ PHYLKTC K N+DLGSVVYLLG+TEK+ELTVGEGKVVIATDNLIK+ST
Sbjct: 100 TVDGDSTAQGQQPHYLKTCSKPNLDLGSVVYLLGYTEKKELTVGEGKVVIATDNLIKMST 159

Query: 107 HDGFPWFPGSAGFDVHGNLAFMICDPMKLATSPNT 3
            DG  W PGSAGFD  GNLAFMICDPMKLATSP T
Sbjct: 160 -DGVTWSPGSAGFDAQGNLAFMICDPMKLATSPIT 193


Top