BLASTX nr result

ID: Glycyrrhiza23_contig00034599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034599
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...   144   6e-33
ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   110   2e-22

>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/83 (79%), Positives = 74/83 (89%)
 Frame = -3

Query: 251 DAYRSFCEVIDKDLLCWTSIIGVYARFGMMSECVRFFWEMQESQIHPDGIVIGCILSGFG 72
           +AY+SF EVI+KDLL WTS+I VYARFGMMS+CVRFFWEM E+Q+ PDG+VIGCILSGFG
Sbjct: 267 EAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFG 326

Query: 71  NSADVSGGKVFHGLIIRRHYVPD 3
           NS DV GGK FHGLIIRRHY PD
Sbjct: 327 NSVDVYGGKAFHGLIIRRHYAPD 349


>ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = -3

Query: 251 DAYRSFCEVIDKDLLCWTSIIGVYARFGMMSECVRFFWEMQESQIHPDGIVIGCILSGFG 72
           +AYRSFCEVI KDLLCWTS+IGVYAR GMM EC+R F EMQE++I PDG+V+GC+LSGFG
Sbjct: 258 EAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFG 317

Query: 71  NSADVSGGKVFHGLIIRRHYVPD 3
           NS DV  GK FHG+IIRR+YV D
Sbjct: 318 NSMDVFQGKAFHGVIIRRYYVDD 340


>ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score =  119 bits (299), Expect = 2e-25
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = -3

Query: 251 DAYRSFCEVIDKDLLCWTSIIGVYARFGMMSECVRFFWEMQESQIHPDGIVIGCILSGFG 72
           +A+ SFC+V+DKD+  WTS+IGV ARFG M+EC+  FW+MQ   ++PDGIV+ CIL GFG
Sbjct: 288 EAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFG 347

Query: 71  NSADVSGGKVFHGLIIRRHYVPD 3
           NS  V  GK FHGLI+RR+YV D
Sbjct: 348 NSMMVREGKAFHGLIVRRNYVLD 370


>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/83 (59%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 DAYRSFCEVIDKDLLCWTSIIGVYARFGMMSECVRFFWEMQESQIHPDGIVIGCILSGFG 72
           +A+RSFCEV++KD++ WTS+I  Y+R G  +EC+  FWEM  S I+PDGIVI C+LS F 
Sbjct: 291 EAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFS 350

Query: 71  NSADVSGGKVFHGLIIRRHYVPD 3
           NS  V   K FHGLIIRRHY  D
Sbjct: 351 NSMRVFEAKAFHGLIIRRHYTLD 373


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/83 (59%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 DAYRSFCEVIDKDLLCWTSIIGVYARFGMMSECVRFFWEMQESQIHPDGIVIGCILSGFG 72
           +A+RSFCEV++KD++ WTS+I  Y+R G  +EC+  FWEM  S I+PDGIVI C+LS F 
Sbjct: 620 EAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFS 679

Query: 71  NSADVSGGKVFHGLIIRRHYVPD 3
           NS  V   K FHGLIIRRHY  D
Sbjct: 680 NSMRVFEAKAFHGLIIRRHYTLD 702


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