BLASTX nr result

ID: Glycyrrhiza23_contig00034565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034565
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   199   1e-49
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   196   1e-48
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
gb|ABK92768.1| unknown [Populus trichocarpa]                          188   3e-46
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   160   1e-37

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  199 bits (507), Expect = 1e-49
 Identities = 84/148 (56%), Positives = 113/148 (76%)
 Frame = +2

Query: 56  YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 235
           YSS+ GAW+KS EICQC+ NL KNKG+++GG+LHWLTDGDQVL+F++E ELSWLIS P P
Sbjct: 179 YSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFP 238

Query: 236 ALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPHL 415
            +    +PE CIGE  G+LHY+ +SE+GL VW LEDYY+  W+L    +L  +E E   L
Sbjct: 239 TIHLTAIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSLVHSTTLEVMEEENSQL 298

Query: 416 FLNLKNRVSERVSMDTTPWMNPLGFQDG 499
             N ++RV++R+S+D+ PWM+PL F+DG
Sbjct: 299 LYNTRDRVAQRISIDSIPWMDPLAFKDG 326


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  196 bits (499), Expect = 1e-48
 Identities = 88/148 (59%), Positives = 112/148 (75%)
 Frame = +2

Query: 56  YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 235
           YSS TG+W  S +IC C+SNL KNKGVYI GVLHWLTD DQ+LTFDV+ EL++LIS PVP
Sbjct: 175 YSSRTGSWNLSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVP 234

Query: 236 ALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPHL 415
           A EF T P+ACIGE EG LHYV +SEEG H+W LEDY+E  W LK  K+L ++E E+P  
Sbjct: 235 AAEFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKTLAEMEQEHPKF 294

Query: 416 FLNLKNRVSERVSMDTTPWMNPLGFQDG 499
            LN++  V  +++ D +PW++ L F+DG
Sbjct: 295 LLNMQELVKLQMTDDVSPWVDSLAFKDG 322


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  188 bits (478), Expect = 3e-46
 Identities = 85/148 (57%), Positives = 111/148 (75%)
 Frame = +2

Query: 56  YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 235
           Y+S T  W+ S E+C CD++L KN+G++ GG+LHWLTDGDQ+LTF+VE EL+ LIS P+P
Sbjct: 181 YASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP 240

Query: 236 ALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPHL 415
           A EF T P ACIGE EG+L+YV +SEEGLHVW LEDY++  W+LK  K+L  IE E+  +
Sbjct: 241 AGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDI 300

Query: 416 FLNLKNRVSERVSMDTTPWMNPLGFQDG 499
            +NL NRV     +D  PWM+PL F+DG
Sbjct: 301 MINLYNRVMLWQRIDDRPWMDPLAFKDG 328


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  188 bits (478), Expect = 3e-46
 Identities = 85/148 (57%), Positives = 111/148 (75%)
 Frame = +2

Query: 56  YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 235
           Y+S T  W+ S E+C CD++L KN+G++ GG+LHWLTDGDQ+LTF+VE EL+ LIS P+P
Sbjct: 181 YASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLP 240

Query: 236 ALEFRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPHL 415
           A EF T P ACIGE EG+L+YV +SEEGLHVW LEDY++  W+LK  K+L  IE E+  +
Sbjct: 241 AGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDI 300

Query: 416 FLNLKNRVSERVSMDTTPWMNPLGFQDG 499
            +NL NRV     +D  PWM+PL F+DG
Sbjct: 301 MINLYNRVMLWQRIDDRPWMDPLAFKDG 328


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/148 (51%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
 Frame = +2

Query: 56  YSSETGAWRKSNEICQCDSNLIKNKGVYIGGVLHWLTDGDQVLTFDVEKELSWLISVPVP 235
           YSSETG W++S+E+C  D NL+KN G Y  GVLHWLTD DQ+L FD EKELS L+  P+P
Sbjct: 184 YSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIP 243

Query: 236 ALE-FRTVPEACIGEYEGKLHYVQVSEEGLHVWYLEDYYEFKWTLKLWKSLVDIEVEYPH 412
           ALE F   P  CIGE +G LH++ + E+G+ VW L+DY+E KWTLK  K L  IE E P+
Sbjct: 244 ALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENPN 303

Query: 413 LFLNLKNRVSERVSMDTTPWMNPLGFQD 496
           +F  L   +  +      P+M+P  F+D
Sbjct: 304 MFFKLYKIMQRKRLPGMEPYMDPWAFKD 331


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