BLASTX nr result

ID: Glycyrrhiza23_contig00034564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034564
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811...   102   3e-20
ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810...    99   4e-19
ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...    99   5e-19
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795...    98   6e-19
ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago ...    94   2e-17

>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
          Length = 1423

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/86 (60%), Positives = 59/86 (68%)
 Frame = -1

Query: 263 KKFSNDYAERQKPFNYSQQSFQGGHQYSYAPHARRSLGRRPPHALITFGFGGKLIVMKDX 84
           K FSND+ E QKPF+YS QS QGGHQYS+APH  RS   RP HAL+TFGFGGKLI+MKD 
Sbjct: 524 KVFSNDFTENQKPFSYSPQSIQGGHQYSHAPHVGRSSAGRPSHALVTFGFGGKLIIMKDP 583

Query: 83  XXXXSTCGXXXXXXXXXXVLNLMEVV 6
               S+ G          VLNL+EVV
Sbjct: 584 NLLSSSYGSQNSVQGSVSVLNLIEVV 609


>ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810562 [Glycine max]
          Length = 1420

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/86 (58%), Positives = 58/86 (67%)
 Frame = -1

Query: 263 KKFSNDYAERQKPFNYSQQSFQGGHQYSYAPHARRSLGRRPPHALITFGFGGKLIVMKDX 84
           K FSND+ E +KP +YS QS QGGHQYS+APH  RS   RP HAL+TFGFGGKLI+MKD 
Sbjct: 522 KVFSNDFTENEKPLSYSPQSIQGGHQYSHAPHVGRSSAGRPSHALVTFGFGGKLIIMKDP 581

Query: 83  XXXXSTCGXXXXXXXXXXVLNLMEVV 6
               S+ G          VLNL+EVV
Sbjct: 582 NLLSSSYGSQDSVQGSVSVLNLIEVV 607


>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1523

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = -1

Query: 263 KKFSNDYAERQKPFNYSQQSFQGGHQYSYAPHARRSLGRRPPHALITFGFGGKLIVMKDX 84
           K  SNDYAE  +PF YS QS+Q GHQ SYAP+  RS   RPPHAL+TFGFGGKLI++KD 
Sbjct: 496 KNISNDYAESHQPFGYSNQSYQSGHQQSYAPNVGRSSAGRPPHALVTFGFGGKLIILKDS 555

Query: 83  XXXXSTCGXXXXXXXXXXVLNLMEVV 6
               ST G          VLNLME V
Sbjct: 556 SLSSSTYGSQGAAQGSVSVLNLMEAV 581


>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
          Length = 1424

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/84 (59%), Positives = 57/84 (67%)
 Frame = -1

Query: 257 FSNDYAERQKPFNYSQQSFQGGHQYSYAPHARRSLGRRPPHALITFGFGGKLIVMKDXXX 78
           FSND+ E QKPF+YS QS QGGHQYS+ PH  RS   RP HAL+TFGFGGKLI+MKD   
Sbjct: 524 FSNDFTEIQKPFSYSSQSIQGGHQYSHNPHVGRSSAGRPSHALVTFGFGGKLIIMKDPNL 583

Query: 77  XXSTCGXXXXXXXXXXVLNLMEVV 6
             S+ G          VLNL+EVV
Sbjct: 584 LSSSYGSQDSVQGSISVLNLIEVV 607


>ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago truncatula]
           gi|355512644|gb|AES94267.1| COPII coat assembly protein
           sec16 [Medicago truncatula]
          Length = 1584

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = -1

Query: 263 KKFSNDYAERQKPFNYSQQSFQGGHQYSYAPHARRSLGRRPPHALITFGFGGKLIVMKDX 84
           K+FSN +AE Q   +YSQQ  QGG QYSYAPHA RS   RP HAL+TFGFGGKLI+MKD 
Sbjct: 649 KQFSNVFAENQNSHSYSQQPIQGGLQYSYAPHAGRSSAGRPSHALVTFGFGGKLIIMKDP 708

Query: 83  XXXXSTCGXXXXXXXXXXVLNLMEVV 6
               ++ G          VLNLME V
Sbjct: 709 SALTASYGSQDSVQGSISVLNLMEAV 734


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