BLASTX nr result

ID: Glycyrrhiza23_contig00034563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034563
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptas...   169   2e-40
ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797...   167   1e-39
ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792...   167   1e-39
gb|ABN08473.1| reverse transcriptase - beet retrotransposon, put...   166   2e-39
emb|CAN82386.1| hypothetical protein VITISV_029348 [Vitis vinifera]   165   3e-39

>gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 320

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/130 (62%), Positives = 104/130 (80%)
 Frame = +1

Query: 1   GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
           GKL +G N++FI LIPK  NPQK+  FRPISL+G MYK+L+KVL+NRLR VI  +ISD Q
Sbjct: 11  GKLTKGINNTFITLIPKVDNPQKLNDFRPISLLGSMYKILAKVLSNRLRLVIGSVISDSQ 70

Query: 181 SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
           SAF++ RQILD IL+AN +VD+A +  ++++LFKVDFEKAY+SV W YLD +  RMGF  
Sbjct: 71  SAFVRDRQILDGILVANGIVDEACKCRKDLMLFKVDFEKAYESVDWGYLDAITGRMGFPT 130

Query: 361 VWRKWISECL 390
           +WRKWI EC+
Sbjct: 131 LWRKWIKECV 140


>ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797642 [Glycine max]
          Length = 2447

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/132 (59%), Positives = 103/132 (78%)
 Frame = +1

Query: 1    GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
            G   RGSN+SF+ LIPK  +PQ +  +RPISLIGCMYKV+SK+LANRLR VI  ++ + Q
Sbjct: 1579 GSFPRGSNASFMALIPKSNHPQSLNDYRPISLIGCMYKVISKLLANRLRTVISGIVDERQ 1638

Query: 181  SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
            SAFIK R IL  I+I NE+V++A +  + V++FKVDFEKAYD+VSW +LDYM+SR+GF  
Sbjct: 1639 SAFIKDRHILHGIMILNEVVEEAMKTKQPVMVFKVDFEKAYDTVSWSFLDYMLSRLGFCT 1698

Query: 361  VWRKWISECLTS 396
             WR+WI+ CL S
Sbjct: 1699 KWRQWIAACLQS 1710



 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/132 (58%), Positives = 99/132 (75%)
 Frame = +1

Query: 1   GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
           G   +GSN+SF+ LIPK  +PQ    +RPIS IGCMYKV++K+LANRL+ VI  LI + Q
Sbjct: 553 GCFPKGSNASFLALIPKINHPQTFDDYRPISFIGCMYKVIAKLLANRLKLVISALIDERQ 612

Query: 181 SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
           +AFIK R IL   LI NE++++A R  + V++FKVDFEKAYD VSW +LDYM+ RMGF  
Sbjct: 613 TAFIKERHILHGTLILNEVIEEACRCKKPVMVFKVDFEKAYDPVSWSFLDYMLQRMGFCP 672

Query: 361 VWRKWISECLTS 396
            WR+WIS CLT+
Sbjct: 673 KWRQWISACLTT 684


>ref|XP_003548655.1| PREDICTED: uncharacterized protein LOC100792785 [Glycine max]
          Length = 685

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/132 (59%), Positives = 103/132 (78%)
 Frame = +1

Query: 1   GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
           G   RG+N+SF+ LIPK  +PQ +  +RPISLIGCMYKV++K+LANRLR VI  +I + Q
Sbjct: 183 GSFPRGNNASFLALIPKTIHPQSLNDYRPISLIGCMYKVIAKLLANRLRSVISGIIDERQ 242

Query: 181 SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
           SAFIK R IL  +LI NE+V++A ++ + V++FKVDF+KAYDSVSW +LDYM+ R+GF  
Sbjct: 243 SAFIKDRHILHGVLILNEVVEEALKRKKPVMVFKVDFKKAYDSVSWSFLDYMLIRLGFYP 302

Query: 361 VWRKWISECLTS 396
            WRKWI+ CL S
Sbjct: 303 KWRKWIAACLQS 314


>gb|ABN08473.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 297

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/132 (59%), Positives = 108/132 (81%)
 Frame = +1

Query: 1   GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
           GKL +G N++FI LIPK  + QK+  FRP SL+G +YK+L+K+LANRLRGVI  +ISD Q
Sbjct: 136 GKLSKGINTTFIALIPKVDSLQKLNDFRPFSLVGRLYKILAKLLANRLRGVIGSVISDSQ 195

Query: 181 SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
           SAF+K R+ILD ILIANE+VD+A++KN++++LFK DFEKAYDS+   YLD ++++M F  
Sbjct: 196 SAFVKNRKILDGILIANEVVDEARKKNKDLMLFKADFEKAYDSIDLGYLDSVLAQMSFPV 255

Query: 361 VWRKWISECLTS 396
           +WRKWI EC+++
Sbjct: 256 LWRKWIRECVST 267


>emb|CAN82386.1| hypothetical protein VITISV_029348 [Vitis vinifera]
          Length = 2062

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/132 (56%), Positives = 104/132 (78%)
 Frame = +1

Query: 1    GKLVRGSNSSFIVLIPKKANPQKVAHFRPISLIGCMYKVLSKVLANRLRGVIHLLISDCQ 180
            G + + +N+SFIVL+PKK+  +K++ +RPISLI  +YK+++KVLA RLRG++H  I   Q
Sbjct: 1482 GIINQSTNASFIVLLPKKSMAKKISDYRPISLITSLYKIIAKVLARRLRGILHETIHSTQ 1541

Query: 181  SAFIKGRQILDSILIANEMVDDAKRKNREVVLFKVDFEKAYDSVSWQYLDYMMSRMGFNQ 360
             AF++GRQILD++LIANE+VD+ KR   E V+FK+DFEKAYD VSW +LD++M + GFN 
Sbjct: 1542 GAFVQGRQILDAVLIANEIVDEKKRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEKKGFNP 1601

Query: 361  VWRKWISECLTS 396
             WRKWI  CL+S
Sbjct: 1602 RWRKWIRGCLSS 1613


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