BLASTX nr result
ID: Glycyrrhiza23_contig00034546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00034546
(276 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ... 161 6e-38
ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containi... 156 1e-36
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi... 140 8e-32
emb|CBI21003.3| unnamed protein product [Vitis vinifera] 140 8e-32
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,... 136 2e-30
>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 834
Score = 161 bits (407), Expect = 6e-38
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDGFCKM DMESASKFF+ELL+IGL PNT+VYNSMISGF +LNNMEAALNL+Q+M+ NK
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+PCDLQ YTS+IGGLLKEGKLS ALDLYSEML
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
+I+G K + + ++ G +I YNS+I GF +++AL Y++M +
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
I D+ TYTSLI GL K K+ AL+++S+M
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630
>ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 156 bits (395), Expect = 1e-36
Identities = 76/92 (82%), Positives = 85/92 (92%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LI GFCKMQDME+A KFFS+LLE+GL PNTIVYN MIS +RNLNNMEAALNL+++M+NNK
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK 706
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
IPCDL+ YTSLI GLLKEGKLSFALDLYSEML
Sbjct: 707 IPCDLKIYTSLIDGLLKEGKLSFALDLYSEML 738
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/92 (31%), Positives = 49/92 (53%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
+IDG+ K ++SA + E+ ++PN I Y S+I+GF N M+ AL ++ M
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ D+ Y +LI G K + A +S++L
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLL 668
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/92 (36%), Positives = 49/92 (53%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDG K + A +SE+L G+ P+ +YN +I+G N +E A + ++M N
Sbjct: 717 LIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNN 776
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
I + Y +LI G KEG L A L+ EML
Sbjct: 777 ITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/91 (28%), Positives = 52/91 (57%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
+I+G CK+ + A + ++ P ++ YN +I G+ +++A ++Y++M ++
Sbjct: 542 IINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSE 601
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
I ++ TYTSLI G K K+ AL ++ +M
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDM 632
>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 140 bits (354), Expect = 8e-32
Identities = 69/92 (75%), Positives = 79/92 (85%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDGFCK +DMESA F ELLE+GL+PN IVYNSMISGFR+LNNMEAAL Y+KM+N++
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
IPCDL TYT+LI GLLKEG+L FA DLY EML
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
++DGF K +++SA + E+ E G++PN + Y S+I+GF N ++ AL +M
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ D+ Y++LI G K + A DL+ E+L
Sbjct: 675 LELDVTAYSALIDGFCKRRDMESAQDLFFELL 706
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
+I+G CK+ M A LE G P+ + YNS++ GF N+++AL +Y++M
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
+ ++ TYTSLI G K ++ AL EM
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/91 (32%), Positives = 46/91 (50%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDG K D E A F ++L + +AP +N++I+G + M A + + L
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
TY S++ G +KEG + AL +Y EM
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREM 635
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
++ CK M+ A ++ G+ PN + YN MI G NM+ A +++ ML
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ ++ TY+ LI G K+G ALDL+ +ML
Sbjct: 535 LKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
L+ G+C +++SA F+++ E GL PN + Y+ +I G N N+E A LY +M N
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSE 270
IP + SL+ G LK A L+ E
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLN-N 177
+I G C+ +M+ AS FS++L L PN + Y+ +I G + E AL+L+ +ML+ N
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 178 KIPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
P D T+ ++I GL K G++S A D L
Sbjct: 570 IAPTDF-TFNTIINGLCKVGQMSEARDKLKNFL 601
>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 140 bits (354), Expect = 8e-32
Identities = 69/92 (75%), Positives = 79/92 (85%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDGFCK +DMESA F ELLE+GL+PN IVYNSMISGFR+LNNMEAAL Y+KM+N++
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
IPCDL TYT+LI GLLKEG+L FA DLY EML
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
++DGF K +++SA + E+ E G++PN + Y S+I+GF N ++ AL +M
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ D+ Y++LI G K + A DL+ E+L
Sbjct: 635 LELDVTAYSALIDGFCKRRDMESAQDLFFELL 666
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
+I+G CK+ M A LE G P+ + YNS++ GF N+++AL +Y++M
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
+ ++ TYTSLI G K ++ AL EM
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/91 (32%), Positives = 46/91 (50%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDG K D E A F ++L + +AP +N++I+G + M A + + L
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
TY S++ G +KEG + AL +Y EM
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREM 595
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
++ CK M+ A ++ G+ PN + YN MI G NM+ A +++ ML
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ ++ TY+ LI G K+G ALDL+ +ML
Sbjct: 495 LKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
L+ G+C +++SA F+++ E GL PN + Y+ +I G N N+E A LY +M N
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSE 270
IP + SL+ G LK A L+ E
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDE 420
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLN-N 177
+I G C+ +M+ AS FS++L L PN + Y+ +I G + E AL+L+ +ML+ N
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 178 KIPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
P D T+ ++I GL K G++S A D L
Sbjct: 530 IAPTDF-TFNTIINGLCKVGQMSEARDKLKNFL 561
>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 927
Score = 136 bits (343), Expect = 2e-30
Identities = 66/91 (72%), Positives = 79/91 (86%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LIDGFCK QD+E+AS FSELL+ GL+PN+++YNS+ISG+RNLNNMEAALNL ++ML
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
I CDLQTYT+LI GLLKEG+L ALDLYSEM
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
++DGF K + SA + E+ E G++PN I Y ++I+GF NN + AL + +M N
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ D+ Y +LI G K+ + A L+SE+L
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELL 690
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/92 (36%), Positives = 50/92 (54%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
LI GF K++ E ASK F E + +A N YNS++S M A L+QKML+
Sbjct: 425 LIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ +Y S+I G ++G L A ++S+ML
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/90 (31%), Positives = 47/90 (52%)
Frame = +1
Query: 4 IDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNKI 183
I+G CK+ A + +E G P + YNS++ GF ++ +AL Y++M + +
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624
Query: 184 PCDLQTYTSLIGGLLKEGKLSFALDLYSEM 273
++ TYT+LI G K AL + +EM
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEM 654
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLN-N 177
+I G C+ +++ A+ FS++L+ GL PN I Y+ ++ G+ + E A ++ +M++ N
Sbjct: 494 MILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN 553
Query: 178 KIPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+P D TY I GL K G+ S A D+ + +
Sbjct: 554 IVPSDF-TYNIKINGLCKVGRTSEAQDMLKKFV 585
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Frame = +1
Query: 1 LIDGFCKMQDMESASKFFSELLEIGLAPNTIVYNSMISGFRNLNNMEAALNLYQKMLNNK 180
L+ CK M A+ + ++L+ GLAP + YNSMI G N++ A +++ ML+
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518
Query: 181 IPCDLQTYTSLIGGLLKEGKLSFALDLYSEML 276
+ ++ TY+ L+ G K G +A ++ M+
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMV 550