BLASTX nr result

ID: Glycyrrhiza23_contig00034542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034542
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   163   2e-38
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...    97   1e-18
emb|CBI22513.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...    89   5e-16
gb|AAC79145.1| hypothetical protein [Arabidopsis thaliana] gi|97...    79   4e-13

>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/122 (67%), Positives = 95/122 (77%)
 Frame = -1

Query: 367 DLSRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAEDERYVQGELEPNN 188
           +LS Q S +SDD + ENTNAI MEE TSV       E AG SN A +DER V+GELEP +
Sbjct: 237 ELSGQISTESDDTIPENTNAIMMEELTSV------REHAGGSNAATKDERNVKGELEPAH 290

Query: 187 REPSTSTSNPCSHDQNVKEFPSSAATRPSKQCHSTVDDPNFVENYFKSSRLHFIGTWRNR 8
           + PSTS S PCS + NVKE+P+S+ T+PSKQCHST+ DPNFVENYFKSSRLHFIGTWRNR
Sbjct: 291 QAPSTSFSTPCSDELNVKEYPNSSGTKPSKQCHSTLADPNFVENYFKSSRLHFIGTWRNR 350

Query: 7   YR 2
           YR
Sbjct: 351 YR 352


>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/122 (44%), Positives = 74/122 (60%)
 Frame = -1

Query: 367 DLSRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAEDERYVQGELEPNN 188
           + +RQ+S + DD   ENTN   +E+P S   K  E ++  +S    E+E  ++ EL+ + 
Sbjct: 249 EYTRQSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKMEEQSFSNQEEECSIKNELQSSP 308

Query: 187 REPSTSTSNPCSHDQNVKEFPSSAATRPSKQCHSTVDDPNFVENYFKSSRLHFIGTWRNR 8
             PS S S+    D   KE  S+     S + HST++DPNFVENYFK SRLHFIGTWRNR
Sbjct: 309 HRPSASVSSYYL-DNARKESSSTTVVGCSNKGHSTLEDPNFVENYFKYSRLHFIGTWRNR 367

Query: 7   YR 2
           Y+
Sbjct: 368 YQ 369


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/120 (45%), Positives = 72/120 (60%)
 Frame = -1

Query: 361 SRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAEDERYVQGELEPNNRE 182
           S Q+S + DD   ENTN   +E+P S   K  E ++  +S    E+E  ++ EL+ +   
Sbjct: 229 SVQSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKMEEQSFSNQEEECSIKNELQSSPHR 288

Query: 181 PSTSTSNPCSHDQNVKEFPSSAATRPSKQCHSTVDDPNFVENYFKSSRLHFIGTWRNRYR 2
           PS S S+    D   KE  S+     S + HST++DPNFVENYFK SRLHFIGTWRNRY+
Sbjct: 289 PSASVSSYYL-DNARKESSSTTVVGCSNKGHSTLEDPNFVENYFKYSRLHFIGTWRNRYQ 347


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
 Frame = -1

Query: 325 SENTNAITMEEPTSVGVK---------CDEEELAGRSNDAAEDERYVQGELEPNNREPST 173
           S++TN   + +P   G           C+ EE + RS+ ++E         E  N     
Sbjct: 224 SQDTNLPEVNDPVKYGKPIDGQFDYPDCEIEETSSRSSKSSELRIEEPSNTEGENNVYHE 283

Query: 172 STSNPCSHDQNVKEFPSSAATRPSKQCHSTVDDPNFVENYFKSSRLHFIGTWRNRYR 2
             S+P   D +++  P+ A  RPS   HST++DPNFVENYFKSSRLHFIGTWRNRYR
Sbjct: 284 LQSSP--RDHSIESTPTPAIARPSNPRHSTLEDPNFVENYFKSSRLHFIGTWRNRYR 338


>gb|AAC79145.1| hypothetical protein [Arabidopsis thaliana]
           gi|9758379|dbj|BAB08828.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 955

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 51/114 (44%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = -1

Query: 337 DDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAEDERYVQGELEPNNREPSTSTSNP 158
           D +  ENT     E+  +  +K  E    G  N   E E+ V  EL+      STS +  
Sbjct: 176 DGVYIENTTPELTEQTGTGDLKSSEMNAEGLGNYDIE-EKEVSSELQSTTNLHSTSDNK- 233

Query: 157 CSHDQNVKEFPSSAATRP--SKQCHSTVDDPNFVENYFKSSRLHFIGTWRNRYR 2
            S   N K    S AT    S + HST++DPNFVENYFK+SRLHFIGTWRNRYR
Sbjct: 234 -SVHANGKNGGKSIATAAGSSTRRHSTLEDPNFVENYFKNSRLHFIGTWRNRYR 286


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