BLASTX nr result

ID: Glycyrrhiza23_contig00034528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034528
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607649.1| RING finger protein [Medicago truncatula] gi...   143   2e-32
ref|XP_003526206.1| PREDICTED: uncharacterized protein LOC100802...   114   8e-24
ref|XP_003526219.1| PREDICTED: uncharacterized protein LOC100810...   112   4e-23
ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819...   108   5e-22
ref|XP_003607640.1| hypothetical protein MTR_4g080600 [Medicago ...    81   1e-13

>ref|XP_003607649.1| RING finger protein [Medicago truncatula]
           gi|355508704|gb|AES89846.1| RING finger protein
           [Medicago truncatula]
          Length = 276

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/111 (66%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
 Frame = -3

Query: 325 MSHNMNNFTPLPGLWRTGVRAYDAPPHTSNSNIESNEVPVFHRS-HSTQVTDERGSGVVH 149
           MS NMNNFTPLPGL RT  RAY AP HTSN+  E NEVPVF+RS HS++  DER SG   
Sbjct: 1   MSRNMNNFTPLPGLRRTDSRAYGAPHHTSNNPHEFNEVPVFYRSHHSSRANDERSSGAQD 60

Query: 148 QLRLWEV-RTPTRHHSIPNFPAQPHSRQQTYVRNGDM-GRGFNPTRLREIF 2
            L+LWE+ RTP  HH IP FP QPH RQQTY  N DM  RG+NPTR+REIF
Sbjct: 61  PLQLWEIRRTPAEHHRIPYFPLQPHRRQQTYNHNEDMRRRGYNPTRIREIF 111


>ref|XP_003526206.1| PREDICTED: uncharacterized protein LOC100802085 [Glycine max]
          Length = 262

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/108 (57%), Positives = 71/108 (65%)
 Frame = -3

Query: 325 MSHNMNNFTPLPGLWRTGVRAYDAPPHTSNSNIESNEVPVFHRSHSTQVTDERGSGVVHQ 146
           MS NMNNFTPLPG W+ G R++D   HT N   ESNEVPVF+RSHST  TD R SGV+ +
Sbjct: 1   MSRNMNNFTPLPGSWQRGFRSFD--DHTFNHR-ESNEVPVFYRSHSTHATDGRSSGVLAR 57

Query: 145 LRLWEVRTPTRHHSIPNFPAQPHSRQQTYVRNGDMGRGFNPTRLREIF 2
            R  + R P   HSIPNFPA P  RQQ +  N D+G      RLREIF
Sbjct: 58  ERFSDFRNPLGFHSIPNFPAPPPRRQQIHAHNEDIG------RLREIF 99


>ref|XP_003526219.1| PREDICTED: uncharacterized protein LOC100810607 [Glycine max]
          Length = 262

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/108 (56%), Positives = 70/108 (64%)
 Frame = -3

Query: 325 MSHNMNNFTPLPGLWRTGVRAYDAPPHTSNSNIESNEVPVFHRSHSTQVTDERGSGVVHQ 146
           MS N+NNFTPLPG W+ G R++D   HT N   ESNEVPVF+ SHST  TD R SGV+ +
Sbjct: 1   MSRNINNFTPLPGSWQRGFRSFD--DHTFNHR-ESNEVPVFYGSHSTHATDGRSSGVLAR 57

Query: 145 LRLWEVRTPTRHHSIPNFPAQPHSRQQTYVRNGDMGRGFNPTRLREIF 2
            R  + R P   HSIPNFPA P  RQQ +  N DMG      RLREIF
Sbjct: 58  QRFSDFRNPLGFHSIPNFPAPPPRRQQIHAHNEDMG------RLREIF 99


>ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819139 [Glycine max]
          Length = 262

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/108 (57%), Positives = 70/108 (64%)
 Frame = -3

Query: 325 MSHNMNNFTPLPGLWRTGVRAYDAPPHTSNSNIESNEVPVFHRSHSTQVTDERGSGVVHQ 146
           MS NMNNFT L G W+T  R+ D   HT N   ESNEVPVF+RSHST VTD+R SGV+ +
Sbjct: 1   MSRNMNNFTHLLGPWQTDFRSNDG--HTFNHR-ESNEVPVFYRSHSTHVTDDRSSGVLAR 57

Query: 145 LRLWEVRTPTRHHSIPNFPAQPHSRQQTYVRNGDMGRGFNPTRLREIF 2
            R  + R P   HSIPNFPA P  RQQ +V N DM       RLREIF
Sbjct: 58  QRFSDFRNPLGFHSIPNFPAPPPRRQQIHVHNEDM------RRLREIF 99


>ref|XP_003607640.1| hypothetical protein MTR_4g080600 [Medicago truncatula]
           gi|355508695|gb|AES89837.1| hypothetical protein
           MTR_4g080600 [Medicago truncatula]
          Length = 165

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/110 (50%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = -3

Query: 325 MSHNMNNFTPLPGLWRTGVRAYDAPPHTSNSNIESNEVPVFHRSHSTQVTDERGSG---V 155
           MS NMNNFTPLP L RT  RAYDAPPHTSN+  E NEVPVF RS +      RG     V
Sbjct: 1   MSRNMNNFTPLPRLRRTDSRAYDAPPHTSNNPHEFNEVPVFFRSITLLEPMMRGRSTPLV 60

Query: 154 VHQLRLWEVRTPTRHHSIPNFPAQPHSRQQTYVRNGDM-GRGFNPTRLRE 8
             Q   +     T   S         +  QTY  N DM  RGFNPTR RE
Sbjct: 61  GSQKNSYRTSQDTIFSS---------TTPQTYNHNEDMRRRGFNPTRQRE 101


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