BLASTX nr result

ID: Glycyrrhiza23_contig00034503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034503
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    98   6e-19
gb|AFK48593.1| unknown [Lotus japonicus]                               91   1e-16
gb|ABN08573.1| Ribonuclease H [Medicago truncatula]                    77   1e-12
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    74   9e-12
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    72   4e-11

>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/112 (45%), Positives = 70/112 (62%)
 Frame = -3

Query: 355 ELAAIFFGLSMVWDQGMRKLVCYSDSKLVIELSLKSMNDNHAHGALISAIKDLLHRDWEV 176
           E++ ++ GL + WD G++ +VC+SDS  V++L  K +N +H +G LI AIK LL RDW V
Sbjct: 123 EISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVV 182

Query: 175 QLSYTLREGNESANLLAKTRALQQEQLWILPRPPAAIGASLLADAMRTPLLR 20
            L +TL EGN +A+ LAK  AL    L IL   P  I   LLADA+    +R
Sbjct: 183 SLRHTLCEGNAAADFLAKKGALSDTSLVILNEAPPDIAFVLLADAVGVKFVR 234


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/112 (44%), Positives = 66/112 (58%)
 Frame = -3

Query: 355 ELAAIFFGLSMVWDQGMRKLVCYSDSKLVIELSLKSMNDNHAHGALISAIKDLLHRDWEV 176
           EL  +F GLS+ W+QG R + C SDS+  + L   + +  H + AL+  IKDL  RDW V
Sbjct: 160 ELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIV 219

Query: 175 QLSYTLREGNESANLLAKTRALQQEQLWILPRPPAAIGASLLADAMRTPLLR 20
           +L +TLREGN  A+LL K  A Q + L I   P A +G  LLADA     +R
Sbjct: 220 ELRHTLREGNACADLLVKHGADQNDDLVITENPIAGLGVLLLADARGVSFVR 271


>gb|ABN08573.1| Ribonuclease H [Medicago truncatula]
          Length = 147

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/108 (38%), Positives = 66/108 (61%)
 Frame = -3

Query: 355 ELAAIFFGLSMVWDQGMRKLVCYSDSKLVIELSLKSMNDNHAHGALISAIKDLLHRDWEV 176
           E+ AI+ GL +  + G   ++CYSDSK  I++  K +   H + + I+ I DL++ +WEV
Sbjct: 23  EIIAIYQGLHLARNFGCTYIICYSDSKGGIDILAKPVKKYHCYASAIANIIDLMNLEWEV 82

Query: 175 QLSYTLREGNESANLLAKTRALQQEQLWILPRPPAAIGASLLADAMRT 32
           +L ++LREGN SA+ LAK  +    +  +   PP  + A LL D+MRT
Sbjct: 83  KLCHSLREGNASADFLAKWGSSNDIKWKLRNTPPEDLKAILLNDSMRT 130


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/105 (39%), Positives = 55/105 (52%)
 Frame = -3

Query: 355 ELAAIFFGLSMVWDQGMRKLVCYSDSKLVIELSLKSMNDNHAHGALISAIKDLLHRDWEV 176
           EL AI  GL + WD G R +    D K  ++L L +    H H  ++  I+ L+ RDW +
Sbjct: 57  ELYAILNGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSL 116

Query: 175 QLSYTLREGNESANLLAKTRALQQEQLWILPRPPAAIGASLLADA 41
             ++TLREGNE A+ LAK  A     L +   PP      LLADA
Sbjct: 117 LFNHTLREGNECADWLAKYDAQSDVSLKLWVSPPPQFAHVLLADA 161


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/106 (41%), Positives = 59/106 (55%)
 Frame = -3

Query: 355 ELAAIFFGLSMVWDQGMRKLVCYSDSKLVIELSLKSMNDNHAHGALISAIKDLLHRDWEV 176
           EL AI  GL +V D  + +++CYSDS L + L        H + ALI  IKDLL+ D  +
Sbjct: 122 ELTAIHQGLKLVTDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLLN-DRNI 180

Query: 175 QLSYTLREGNESANLLAKTRALQQEQLWILPRPPAAIGASLLADAM 38
            L +TLREGN+ A+  AK  A     L +   PPA +   L ADA+
Sbjct: 181 SLHHTLREGNQCADFFAKFGANSDAALVVHQSPPADLLPLLRADAL 226


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