BLASTX nr result

ID: Glycyrrhiza23_contig00034469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00034469
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
emb|CBI37724.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11

>ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = -3

Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208
           H FAKLIA+LEQRHIVIRDPIRYHHFQDGVCSCGDYW
Sbjct: 818 HKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854


>emb|CBI37724.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -3

Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208
           H+FAK+++++E R IVIRDPIRYHHFQDGVCSCGDYW
Sbjct: 303 HVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 339


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -3

Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208
           H+FAK+++++E R IVIRDPIRYHHFQDGVCSCGDYW
Sbjct: 587 HVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623


>ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = -3

Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208
           H+F KL+AK+EQR IVIRDP+RYHHFQDG+CSCGD+W
Sbjct: 498 HLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -3

Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208
           HIFAKL+++LE R IVIRDPIRYHHF+ GVCSCGDYW
Sbjct: 550 HIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586


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