BLASTX nr result
ID: Glycyrrhiza23_contig00034469
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00034469 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-14 emb|CBI37724.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-12 ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11 >ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Glycine max] Length = 854 Score = 82.0 bits (201), Expect = 5e-14 Identities = 35/37 (94%), Positives = 36/37 (97%) Frame = -3 Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208 H FAKLIA+LEQRHIVIRDPIRYHHFQDGVCSCGDYW Sbjct: 818 HKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854 >emb|CBI37724.3| unnamed protein product [Vitis vinifera] Length = 339 Score = 75.9 bits (185), Expect = 3e-12 Identities = 29/37 (78%), Positives = 35/37 (94%) Frame = -3 Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208 H+FAK+++++E R IVIRDPIRYHHFQDGVCSCGDYW Sbjct: 303 HVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 339 >ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Vitis vinifera] Length = 623 Score = 75.9 bits (185), Expect = 3e-12 Identities = 29/37 (78%), Positives = 35/37 (94%) Frame = -3 Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208 H+FAK+++++E R IVIRDPIRYHHFQDGVCSCGDYW Sbjct: 587 HVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623 >ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa] Length = 534 Score = 75.1 bits (183), Expect = 6e-12 Identities = 29/37 (78%), Positives = 35/37 (94%) Frame = -3 Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208 H+F KL+AK+EQR IVIRDP+RYHHFQDG+CSCGD+W Sbjct: 498 HLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534 >ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Cucumis sativus] gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Cucumis sativus] Length = 586 Score = 72.8 bits (177), Expect = 3e-11 Identities = 30/37 (81%), Positives = 34/37 (91%) Frame = -3 Query: 318 HIFAKLIAKLEQRHIVIRDPIRYHHFQDGVCSCGDYW 208 HIFAKL+++LE R IVIRDPIRYHHF+ GVCSCGDYW Sbjct: 550 HIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586